Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccr6O54689 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccr6O54689 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.24□□□□□ -0.13
Ccr6O54689 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccr6O54689 Nespas-201ENSMUST00000143738 1083 ntBASIC14.24□□□□□ -0.13
Ccr6O54689 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccr6O54689 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccr6O54689 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccr6O54689 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccr6O54689 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccr6O54689 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccr6O54689 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccr6O54689 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccr6O54689 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccr6O54689 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccr6O54689 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccr6O54689 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccr6O54689 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccr6O54689 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ccr6O54689 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccr6O54689 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccr6O54689 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ccr6O54689 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.22□□□□□ -0.13
Ccr6O54689 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccr6O54689 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccr6O54689 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccr6O54689 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ccr6O54689 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccr6O54689 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccr6O54689 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccr6O54689 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.21□□□□□ -0.13
Ccr6O54689 Gm13241-201ENSMUST00000094493 780 ntBASIC14.21□□□□□ -0.13
Ccr6O54689 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccr6O54689 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccr6O54689 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccr6O54689 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccr6O54689 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccr6O54689 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccr6O54689 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ccr6O54689 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms