Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.05■□□□□ 0.48
Clcn6O35454 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.05■□□□□ 0.48
Clcn6O35454 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Clcn6O35454 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.04■□□□□ 0.48
Clcn6O35454 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.04■□□□□ 0.48
Clcn6O35454 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Clcn6O35454 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.04■□□□□ 0.48
Clcn6O35454 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Clcn6O35454 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Clcn6O35454 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.04■□□□□ 0.48
Clcn6O35454 Gm19324-201ENSMUST00000213229 1169 ntBASIC18.04■□□□□ 0.48
Clcn6O35454 AC154634.2-201ENSMUST00000225983 1184 ntBASIC18.04■□□□□ 0.48
Clcn6O35454 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Clcn6O35454 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.04■□□□□ 0.48
Clcn6O35454 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.04■□□□□ 0.48
Clcn6O35454 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn6O35454 Dancr-204ENSMUST00000132389 2347 ntBASIC18.04■□□□□ 0.48
Clcn6O35454 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.03■□□□□ 0.48
Clcn6O35454 Idnk-204ENSMUST00000226010 1898 ntBASIC18.03■□□□□ 0.48
Clcn6O35454 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Clcn6O35454 AC130831.1-201ENSMUST00000224546 1474 ntBASIC18.03■□□□□ 0.48
Clcn6O35454 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clcn6O35454 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clcn6O35454 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn6O35454 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.02■□□□□ 0.48
Clcn6O35454 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn6O35454 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.02■□□□□ 0.48
Clcn6O35454 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn6O35454 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn6O35454 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC18.02■□□□□ 0.48
Clcn6O35454 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn6O35454 Gm16107-201ENSMUST00000162523 862 ntBASIC18.02■□□□□ 0.48
Clcn6O35454 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.02■□□□□ 0.48
Clcn6O35454 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn6O35454 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn6O35454 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn6O35454 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn6O35454 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Gm14659-201ENSMUST00000117667 843 ntBASIC18.01■□□□□ 0.47
Clcn6O35454 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn6O35454 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.01■□□□□ 0.47
Clcn6O35454 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Clcn6O35454 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms