Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.35□□□□□ -0.11
Prrt1O35449 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prrt1O35449 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.35□□□□□ -0.11
Prrt1O35449 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.35□□□□□ -0.11
Prrt1O35449 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Prrt1O35449 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.35□□□□□ -0.11
Prrt1O35449 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.35□□□□□ -0.11
Prrt1O35449 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.35□□□□□ -0.11
Prrt1O35449 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prrt1O35449 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.34□□□□□ -0.11
Prrt1O35449 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prrt1O35449 Nespas-201ENSMUST00000143738 1083 ntBASIC14.34□□□□□ -0.11
Prrt1O35449 Gm27454-201ENSMUST00000185090 204 ntBASIC14.34□□□□□ -0.11
Prrt1O35449 Gm6420-201ENSMUST00000193885 723 ntBASIC14.34□□□□□ -0.11
Prrt1O35449 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Prrt1O35449 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Prrt1O35449 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prrt1O35449 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Prrt1O35449 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prrt1O35449 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prrt1O35449 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Prrt1O35449 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Prrt1O35449 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.33□□□□□ -0.12
Prrt1O35449 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Prrt1O35449 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Prrt1O35449 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.32□□□□□ -0.12
Prrt1O35449 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.32□□□□□ -0.12
Prrt1O35449 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Prrt1O35449 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Prrt1O35449 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prrt1O35449 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Prrt1O35449 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prrt1O35449 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms