Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Capn1O35350 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Capn1O35350 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Capn1O35350 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Gm10819-201ENSMUST00000099988 561 ntBASIC15.66■□□□□ 0.1
Capn1O35350 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Capn1O35350 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capn1O35350 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.65■□□□□ 0.1
Capn1O35350 Gm6345-202ENSMUST00000180900 204 ntBASIC15.65■□□□□ 0.1
Capn1O35350 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.65■□□□□ 0.1
Capn1O35350 Gm7791-201ENSMUST00000219066 539 ntBASIC15.65■□□□□ 0.1
Capn1O35350 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capn1O35350 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 AA414768-201ENSMUST00000121924 1257 ntBASIC15.64■□□□□ 0.09
Capn1O35350 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
Capn1O35350 Gm18101-201ENSMUST00000215769 548 ntBASIC15.64■□□□□ 0.09
Capn1O35350 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Gm7367-201ENSMUST00000057611 492 ntBASIC15.64■□□□□ 0.09
Capn1O35350 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Capn1O35350 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Capn1O35350 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Capn1O35350 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Capn1O35350 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Capn1O35350 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Capn1O35350 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Capn1O35350 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.63■□□□□ 0.09
Capn1O35350 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Capn1O35350 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Gm16061-201ENSMUST00000122167 857 ntBASIC15.63■□□□□ 0.09
Capn1O35350 Gm22697-201ENSMUST00000175194 63 ntBASIC15.63■□□□□ 0.09
Capn1O35350 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.63■□□□□ 0.09
Capn1O35350 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Capn1O35350 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Capn1O35350 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Capn1O35350 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.62■□□□□ 0.09
Capn1O35350 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms