Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Gm16061-201ENSMUST00000122167 857 ntBASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Gm18959-201ENSMUST00000208954 655 ntBASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11aO35305 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Mir5130-201ENSMUST00000175160 84 ntBASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Mir7071-201ENSMUST00000184847 69 ntBASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11aO35305 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Actl10-202ENSMUST00000226583 1501 ntBASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11aO35305 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Gm10231-201ENSMUST00000181584 441 ntBASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Gm10175-202ENSMUST00000208752 441 ntBASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Phf7-203ENSMUST00000226565 1971 ntBASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11aO35305 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gm7213-201ENSMUST00000215977 950 ntBASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf11aO35305 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms