Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh2b3O09039 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.06■□□□□ 0
Sh2b3O09039 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.06■□□□□ 0
Sh2b3O09039 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.06■□□□□ 0
Sh2b3O09039 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sh2b3O09039 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sh2b3O09039 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sh2b3O09039 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sh2b3O09039 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sh2b3O09039 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sh2b3O09039 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh2b3O09039 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Sh2b3O09039 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sh2b3O09039 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sh2b3O09039 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sh2b3O09039 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sh2b3O09039 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh2b3O09039 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh2b3O09039 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh2b3O09039 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Sh2b3O09039 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.04■□□□□ -0
Sh2b3O09039 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.04■□□□□ -0
Sh2b3O09039 Gm6345-202ENSMUST00000180900 204 ntBASIC15.04■□□□□ -0
Sh2b3O09039 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.04■□□□□ -0
Sh2b3O09039 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sh2b3O09039 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh2b3O09039 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Sh2b3O09039 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Sh2b3O09039 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sh2b3O09039 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.03■□□□□ -0
Sh2b3O09039 Gm16061-201ENSMUST00000122167 857 ntBASIC15.03■□□□□ -0
Sh2b3O09039 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sh2b3O09039 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sh2b3O09039 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh2b3O09039 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sh2b3O09039 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sh2b3O09039 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sh2b3O09039 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sh2b3O09039 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Gm24841-201ENSMUST00000158676 357 ntBASIC15.02■□□□□ -0
Sh2b3O09039 Gm33142-201ENSMUST00000193913 867 ntBASIC15.02■□□□□ -0
Sh2b3O09039 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sh2b3O09039 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh2b3O09039 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh2b3O09039 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sh2b3O09039 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms