Protein–RNA interactions for Protein: O08966

Slc22a1, Solute carrier family 22 member 1, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a1O08966 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc22a1O08966 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc22a1O08966 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc22a1O08966 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Slc22a1O08966 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc22a1O08966 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc22a1O08966 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc22a1O08966 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc22a1O08966 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc22a1O08966 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Slc22a1O08966 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Slc22a1O08966 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Slc22a1O08966 Gm12896-201ENSMUST00000118430 226 ntBASIC15.49■□□□□ 0.07
Slc22a1O08966 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.49■□□□□ 0.07
Slc22a1O08966 Gm4974-201ENSMUST00000209974 875 ntBASIC15.49■□□□□ 0.07
Slc22a1O08966 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Slc22a1O08966 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc22a1O08966 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Slc22a1O08966 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Gm18025-201ENSMUST00000221733 862 ntBASIC15.48■□□□□ 0.07
Slc22a1O08966 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Slc22a1O08966 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc22a1O08966 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Slc22a1O08966 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Slc22a1O08966 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc22a1O08966 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.47■□□□□ 0.07
Slc22a1O08966 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Slc22a1O08966 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.47■□□□□ 0.07
Slc22a1O08966 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Slc22a1O08966 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc22a1O08966 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms