Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
B020004C17RikJ3QP07 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Gm12350-201ENSMUST00000121208 462 ntBASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
B020004C17RikJ3QP07 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.86■□□□□ 0.61
B020004C17RikJ3QP07 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.85■□□□□ 0.61
B020004C17RikJ3QP07 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Gm8969-201ENSMUST00000199694 526 ntBASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
B020004C17RikJ3QP07 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
B020004C17RikJ3QP07 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
B020004C17RikJ3QP07 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
B020004C17RikJ3QP07 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
B020004C17RikJ3QP07 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
B020004C17RikJ3QP07 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
B020004C17RikJ3QP07 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms