Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NpcdF8VQB8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Tgds-204ENSMUST00000228543 1594 ntBASIC20.27■□□□□ 0.84
NpcdF8VQB8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Gm23935-201ENSMUST00000102303 57 ntBASIC20.27■□□□□ 0.84
NpcdF8VQB8 Gm24270-201ENSMUST00000102326 57 ntBASIC20.27■□□□□ 0.84
NpcdF8VQB8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Gm13312-201ENSMUST00000119631 718 ntBASIC20.27■□□□□ 0.84
NpcdF8VQB8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Gm24245-201ENSMUST00000157318 57 ntBASIC20.27■□□□□ 0.84
NpcdF8VQB8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.27■□□□□ 0.84
NpcdF8VQB8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NpcdF8VQB8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
NpcdF8VQB8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NpcdF8VQB8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NpcdF8VQB8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.26■□□□□ 0.83
NpcdF8VQB8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.26■□□□□ 0.83
NpcdF8VQB8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.26■□□□□ 0.83
NpcdF8VQB8 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.26■□□□□ 0.83
NpcdF8VQB8 Mir5126-201ENSMUST00000175513 77 ntBASIC20.26■□□□□ 0.83
NpcdF8VQB8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NpcdF8VQB8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.25■□□□□ 0.83
NpcdF8VQB8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NpcdF8VQB8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Psmb5-202ENSMUST00000227257 622 ntBASIC20.24■□□□□ 0.83
NpcdF8VQB8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NpcdF8VQB8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44357-201ENSMUST00000195897 142 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm19658-201ENSMUST00000196231 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44367-201ENSMUST00000196836 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44350-201ENSMUST00000197197 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44390-201ENSMUST00000197533 144 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44313-201ENSMUST00000198018 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44486-201ENSMUST00000198508 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44454-201ENSMUST00000198541 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44314-201ENSMUST00000199263 138 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms