Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh9F8VPK8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh9F8VPK8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh9F8VPK8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh9F8VPK8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh9F8VPK8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh9F8VPK8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh9F8VPK8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh9F8VPK8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh9F8VPK8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh9F8VPK8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh9F8VPK8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh9F8VPK8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms