Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc188F6WEU2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc188F6WEU2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc188F6WEU2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc188F6WEU2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.08■□□□□ 0.33
Ccdc188F6WEU2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc188F6WEU2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Gm23547-201ENSMUST00000158210 271 ntBASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Mir7023-201ENSMUST00000185093 64 ntBASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc188F6WEU2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Gm7222-201ENSMUST00000117512 906 ntBASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc188F6WEU2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Gm44430-201ENSMUST00000203376 995 ntBASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc188F6WEU2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms