Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Gm17971-201ENSMUST00000190239 806 ntBASIC17.15■□□□□ 0.34
Ccdc149F6V035 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.15■□□□□ 0.34
Ccdc149F6V035 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc149F6V035 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Gm18115-201ENSMUST00000221209 621 ntBASIC17.14■□□□□ 0.33
Ccdc149F6V035 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.14■□□□□ 0.33
Ccdc149F6V035 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc149F6V035 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.13■□□□□ 0.33
Ccdc149F6V035 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.13■□□□□ 0.33
Ccdc149F6V035 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc149F6V035 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.12■□□□□ 0.33
Ccdc149F6V035 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc149F6V035 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.11■□□□□ 0.33
Ccdc149F6V035 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc149F6V035 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms