Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc85cE9Q6B2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Gm11025-201ENSMUST00000140773 466 ntBASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Gm5745-201ENSMUST00000183748 313 ntBASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc85cE9Q6B2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc85cE9Q6B2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc85cE9Q6B2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc85cE9Q6B2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Gm44430-201ENSMUST00000203376 995 ntBASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc85cE9Q6B2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Mir8117-201ENSMUST00000184773 107 ntBASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc85cE9Q6B2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc85cE9Q6B2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc85cE9Q6B2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc85cE9Q6B2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc85cE9Q6B2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc85cE9Q6B2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc85cE9Q6B2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms