Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Gm11336-201ENSMUST00000118168 334 ntBASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Gm18115-201ENSMUST00000221209 621 ntBASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb9E9Q5G2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhb9E9Q5G2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Gm44450-201ENSMUST00000199528 114 ntBASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb9E9Q5G2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb9E9Q5G2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb9E9Q5G2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Gm29518-201ENSMUST00000190858 372 ntBASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb9E9Q5G2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms