Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpsf4lE9Q2N0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Gm13474-201ENSMUST00000122466 815 ntBASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Gm18959-201ENSMUST00000208954 655 ntBASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpsf4lE9Q2N0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Mir5130-201ENSMUST00000175160 84 ntBASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Gm45058-201ENSMUST00000205810 766 ntBASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpsf4lE9Q2N0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cpsf4lE9Q2N0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms