Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 AC154222.1-201ENSMUST00000223882 475 ntBASIC23.75■■□□□ 1.39
Hfm1D3Z4R1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Gm15442-201ENSMUST00000117905 1527 ntBASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 AC127349.1-201ENSMUST00000224590 266 ntBASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hfm1D3Z4R1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Gm7506-201ENSMUST00000207758 815 ntBASIC23.73■■□□□ 1.39
Hfm1D3Z4R1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Gm12260-201ENSMUST00000122447 411 ntBASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Gm43935-201ENSMUST00000203569 1050 ntBASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 AV026068-213ENSMUST00000223675 1171 ntBASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Hfm1D3Z4R1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hfm1D3Z4R1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Hfm1D3Z4R1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Hfm1D3Z4R1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Hfm1D3Z4R1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Gm6550-201ENSMUST00000187574 993 ntBASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Gm15590-201ENSMUST00000078419 552 ntBASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Hfm1D3Z4R1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Gm37584-201ENSMUST00000193595 1290 ntBASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms