Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Gm25990-201ENSMUST00000102440 86 ntBASIC21.83■■□□□ 1.09
Scn7aB1AYL1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn7aB1AYL1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Scn7aB1AYL1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn7aB1AYL1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn7aB1AYL1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn7aB1AYL1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.82■■□□□ 1.08
Scn7aB1AYL1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Gm12497-201ENSMUST00000138778 237 ntBASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn7aB1AYL1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Gm10060-201ENSMUST00000212002 111 ntBASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scn7aB1AYL1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Gm6296-201ENSMUST00000222599 943 ntBASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn7aB1AYL1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Gm27525-201ENSMUST00000184465 107 ntBASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Gm7230-201ENSMUST00000173026 815 ntBASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Gm7506-201ENSMUST00000207758 815 ntBASIC21.79■■□□□ 1.08
Scn7aB1AYL1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn7aB1AYL1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scn7aB1AYL1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Scn7aB1AYL1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn7aB1AYL1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn7aB1AYL1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.77■■□□□ 1.08
Scn7aB1AYL1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.77■■□□□ 1.08
Scn7aB1AYL1 Gm18206-201ENSMUST00000207027 926 ntBASIC21.77■■□□□ 1.08
Scn7aB1AYL1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms