Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ube2uB1AUC4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ube2uB1AUC4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ube2uB1AUC4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ube2uB1AUC4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC25.21■■□□□ 1.63
Ube2uB1AUC4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ube2uB1AUC4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Ube2uB1AUC4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ube2uB1AUC4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Mir1668-201ENSMUST00000184114 107 ntBASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ube2uB1AUC4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Gm3272-201ENSMUST00000181181 1229 ntBASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Gm10566-201ENSMUST00000086739 996 ntBASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ube2uB1AUC4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC25.17■■□□□ 1.62
Ube2uB1AUC4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Ube2uB1AUC4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Gm25016-201ENSMUST00000158399 131 ntBASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Gm10819-201ENSMUST00000099988 561 ntBASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ube2uB1AUC4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Gm8258-201ENSMUST00000055593 1449 ntBASIC25.14■■□□□ 1.62
Ube2uB1AUC4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC25.14■■□□□ 1.62
Ube2uB1AUC4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC25.14■■□□□ 1.61
Ube2uB1AUC4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Ube2uB1AUC4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Ube2uB1AUC4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms