Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd3B1AR17 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Chd3B1AR17 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Chd3B1AR17 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chd3B1AR17 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd3B1AR17 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Chd3B1AR17 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd3B1AR17 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.54■□□□□ 0.24
Chd3B1AR17 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.53■□□□□ 0.24
Chd3B1AR17 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.53■□□□□ 0.24
Chd3B1AR17 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chd3B1AR17 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd3B1AR17 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chd3B1AR17 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chd3B1AR17 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.52■□□□□ 0.24
Chd3B1AR17 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Chd3B1AR17 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd3B1AR17 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.52■□□□□ 0.23
Chd3B1AR17 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd3B1AR17 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.51■□□□□ 0.23
Chd3B1AR17 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.51■□□□□ 0.23
Chd3B1AR17 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd3B1AR17 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Chd3B1AR17 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd3B1AR17 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.5■□□□□ 0.23
Chd3B1AR17 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.5■□□□□ 0.23
Chd3B1AR17 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd3B1AR17 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd3B1AR17 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Chd3B1AR17 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms