Protein–RNA interactions for Protein: A7VMS3

H2-M5, Histocompatibility 2, M region locus 5, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-M5A7VMS3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2-M5A7VMS3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
H2-M5A7VMS3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Gm27389-201ENSMUST00000183622 195 ntBASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H2-M5A7VMS3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H2-M5A7VMS3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.33□□□□□ -0.11
H2-M5A7VMS3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2-M5A7VMS3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Mir1668-201ENSMUST00000184114 107 ntBASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2-M5A7VMS3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2-M5A7VMS3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-M5A7VMS3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2-M5A7VMS3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms