Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Gm7370-201ENSMUST00000219471 767 ntBASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh2d4bA6X942 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh2d4bA6X942 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh2d4bA6X942 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh2d4bA6X942 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh2d4bA6X942 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh2d4bA6X942 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh2d4bA6X942 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh2d4bA6X942 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Gm11355-201ENSMUST00000121120 306 ntBASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh2d4bA6X942 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh2d4bA6X942 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Mir3081-201ENSMUST00000175305 84 ntBASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Gm7213-201ENSMUST00000215977 950 ntBASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh2d4bA6X942 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh2d4bA6X942 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms