Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt28A6BLY7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Krt28A6BLY7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Krt28A6BLY7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Krt28A6BLY7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.73■□□□□ 0.59
Krt28A6BLY7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Krt28A6BLY7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt28A6BLY7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Gm12260-201ENSMUST00000122447 411 ntBASIC18.71■□□□□ 0.59
Krt28A6BLY7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.71■□□□□ 0.59
Krt28A6BLY7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.71■□□□□ 0.59
Krt28A6BLY7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt28A6BLY7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.71■□□□□ 0.58
Krt28A6BLY7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.7■□□□□ 0.58
Krt28A6BLY7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt28A6BLY7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Krt28A6BLY7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Krt28A6BLY7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt28A6BLY7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt28A6BLY7 Gm23935-201ENSMUST00000102303 57 ntBASIC18.69■□□□□ 0.58
Krt28A6BLY7 Gm24270-201ENSMUST00000102326 57 ntBASIC18.69■□□□□ 0.58
Krt28A6BLY7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms