Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Gm9794-201ENSMUST00000202370 423 ntBASIC8.91□□□□□ -0.98
Ubr4A2AN08 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ubr4A2AN08 Gm15853-202ENSMUST00000195518 2041 ntBASIC8.9□□□□□ -0.98
Ubr4A2AN08 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Mir1895-201ENSMUST00000122615 79 ntBASIC8.9□□□□□ -0.98
Ubr4A2AN08 Mir3060-201ENSMUST00000175339 83 ntBASIC8.9□□□□□ -0.98
Ubr4A2AN08 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ubr4A2AN08 AU022133-201ENSMUST00000200601 873 ntBASIC8.9□□□□□ -0.98
Ubr4A2AN08 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ubr4A2AN08 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ubr4A2AN08 AC154767.3-201ENSMUST00000225150 1342 ntBASIC8.9□□□□□ -0.99
Ubr4A2AN08 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Gm14928-201ENSMUST00000120198 477 ntBASIC8.89□□□□□ -0.99
Ubr4A2AN08 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ubr4A2AN08 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm17968-201ENSMUST00000194902 784 ntBASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Nrn1-204ENSMUST00000224323 1779 ntBASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm3928-201ENSMUST00000121141 1307 ntBASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms