Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Shroom2A2ALU4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shroom2A2ALU4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shroom2A2ALU4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Shroom2A2ALU4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shroom2A2ALU4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shroom2A2ALU4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Shroom2A2ALU4 Gm19721-201ENSMUST00000195284 1764 ntBASIC26.72■■□□□ 1.87
Shroom2A2ALU4 Gm27494-201ENSMUST00000184735 189 ntBASIC26.72■■□□□ 1.87
Shroom2A2ALU4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Shroom2A2ALU4 AC131187.1-201ENSMUST00000224567 809 ntBASIC26.72■■□□□ 1.87
Shroom2A2ALU4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shroom2A2ALU4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Shroom2A2ALU4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Shroom2A2ALU4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 H2-Pa-201ENSMUST00000182803 626 ntBASIC26.71■■□□□ 1.87
Shroom2A2ALU4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 AC159295.1-201ENSMUST00000225326 940 ntBASIC26.71■■□□□ 1.87
Shroom2A2ALU4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Shroom2A2ALU4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Shroom2A2ALU4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Shroom2A2ALU4 Mir1895-201ENSMUST00000122615 79 ntBASIC26.7■■□□□ 1.87
Shroom2A2ALU4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Shroom2A2ALU4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Shroom2A2ALU4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC26.7■■□□□ 1.86
Shroom2A2ALU4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC26.7■■□□□ 1.86
Shroom2A2ALU4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC26.69■■□□□ 1.86
Shroom2A2ALU4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shroom2A2ALU4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shroom2A2ALU4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Shroom2A2ALU4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
Shroom2A2ALU4 Gm43272-201ENSMUST00000200599 1584 ntBASIC26.69■■□□□ 1.86
Shroom2A2ALU4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Shroom2A2ALU4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Shroom2A2ALU4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Idnk-204ENSMUST00000226010 1898 ntBASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Shroom2A2ALU4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Shroom2A2ALU4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Shroom2A2ALU4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Shroom2A2ALU4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC26.64■■□□□ 1.86
Shroom2A2ALU4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Shroom2A2ALU4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Shroom2A2ALU4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Shroom2A2ALU4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC26.64■■□□□ 1.86
Shroom2A2ALU4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC26.64■■□□□ 1.85
Shroom2A2ALU4 Gm43545-201ENSMUST00000196765 2779 ntBASIC26.64■■□□□ 1.85
Shroom2A2ALU4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Shroom2A2ALU4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Shroom2A2ALU4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Shroom2A2ALU4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Shroom2A2ALU4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Shroom2A2ALU4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms