Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12d-1A0N8R0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Gm4974-201ENSMUST00000209974 875 ntBASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12d-1A0N8R0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12d-1A0N8R0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12d-1A0N8R0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms