Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc112A0AUP1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc112A0AUP1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc112A0AUP1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Gm5643-201ENSMUST00000117081 966 ntBASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc112A0AUP1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc112A0AUP1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc112A0AUP1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc112A0AUP1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms