Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15039-201ENSMUST00000118914 875 ntBASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10698-201ENSMUST00000182663 604 ntBASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms