Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-2A0A0G2JF93 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13n-2A0A0G2JF93 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Mir7075-201ENSMUST00000184187 82 ntBASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13n-2A0A0G2JF93 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm22325-201ENSMUST00000158904 308 ntBASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm40848-201ENSMUST00000221998 324 ntBASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13n-2A0A0G2JF93 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13n-2A0A0G2JF93 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms