Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-4A0A0B4J1K2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm11539-201ENSMUST00000119837 557 ntBASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm13436-201ENSMUST00000120418 567 ntBASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm18958-201ENSMUST00000174258 762 ntBASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Il3ra-202ENSMUST00000223589 738 ntBASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-4A0A0B4J1K2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9-4A0A0B4J1K2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9-4A0A0B4J1K2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9-4A0A0B4J1K2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav9-4A0A0B4J1K2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9-4A0A0B4J1K2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm43799-201ENSMUST00000201845 579 ntBASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9-4A0A0B4J1K2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms