Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv20A0A0B4J1H5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv20A0A0B4J1H5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbv20A0A0B4J1H5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv20A0A0B4J1H5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trbv20A0A0B4J1H5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms