Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm12382-201ENSMUST00000122005 922 ntBASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv16A0A0B4J1H3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv16A0A0B4J1H3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm24841-201ENSMUST00000158676 357 ntBASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv16A0A0B4J1H3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm17661-201ENSMUST00000170317 270 ntBASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm37025-201ENSMUST00000195159 829 ntBASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm42545-201ENSMUST00000202755 922 ntBASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms