Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm13148-201ENSMUST00000118892 745 ntBASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm15375-201ENSMUST00000119510 849 ntBASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Dancr-204ENSMUST00000132389 2347 ntBASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms