Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm13401-201ENSMUST00000117074 291 ntBASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm44549-201ENSMUST00000208351 577 ntBASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mtag2-201ENSMUST00000058665 714 ntBASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm7290-201ENSMUST00000104990 617 ntBASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm12918-201ENSMUST00000120234 636 ntBASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm15710-201ENSMUST00000121821 636 ntBASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm5075-201ENSMUST00000196916 622 ntBASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms