Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav6d-5A0A075B6B9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm11927-201ENSMUST00000118472 759 ntBASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm10033-202ENSMUST00000211874 928 ntBASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Trav6d-5A0A075B6B9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm6576-201ENSMUST00000169678 883 ntBASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm6365-201ENSMUST00000054711 744 ntBASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm7290-201ENSMUST00000104990 617 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm12918-201ENSMUST00000120234 636 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm15710-201ENSMUST00000121821 636 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm6211-202ENSMUST00000167849 925 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm5075-201ENSMUST00000196916 622 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-5A0A075B6B9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms