Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Gm18958-201ENSMUST00000174258 762 ntBASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6-4A0A075B6B4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-4A0A075B6B4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Gm2274-201ENSMUST00000184539 609 ntBASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-4A0A075B6B4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms