Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.87□□□□□ -0.19
Trav18A0A075B656 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.87□□□□□ -0.19
Trav18A0A075B656 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Gm24841-201ENSMUST00000158676 357 ntBASIC13.86□□□□□ -0.19
Trav18A0A075B656 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.86□□□□□ -0.19
Trav18A0A075B656 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav18A0A075B656 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav18A0A075B656 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Gm37856-201ENSMUST00000191634 999 ntBASIC13.85□□□□□ -0.19
Trav18A0A075B656 Trmt13-210ENSMUST00000198454 880 ntBASIC13.85□□□□□ -0.19
Trav18A0A075B656 Gm43183-201ENSMUST00000200632 547 ntBASIC13.85□□□□□ -0.19
Trav18A0A075B656 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav18A0A075B656 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.84□□□□□ -0.19
Trav18A0A075B656 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.84□□□□□ -0.19
Trav18A0A075B656 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav18A0A075B656 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms