Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-4A0A075B652 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Gm37292-201ENSMUST00000192062 758 ntBASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.16□□□□□ -0.14
Trav5-4A0A075B652 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-4A0A075B652 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav5-4A0A075B652 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Trav5-4A0A075B652 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Gm4974-201ENSMUST00000209974 875 ntBASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-4A0A075B652 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Gm29257-201ENSMUST00000186115 639 ntBASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Gm10517-202ENSMUST00000192970 758 ntBASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Gm43183-201ENSMUST00000200632 547 ntBASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav5-4A0A075B652 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms