Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm26571-201ENSMUST00000181399 666 ntBASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm4974-201ENSMUST00000209974 875 ntBASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4-4-dv10A0A075B651 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Dio3-201ENSMUST00000097228 1449 ntBASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4-4-dv10A0A075B651 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.18□□□□□ -0.3
Trav4-4-dv10A0A075B651 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm18284-201ENSMUST00000172604 624 ntBASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4-4-dv10A0A075B651 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms