Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav10A0A075B642 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav10A0A075B642 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav10A0A075B642 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.03■□□□□ -0
Trav10A0A075B642 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav10A0A075B642 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Trav10A0A075B642 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.02■□□□□ -0
Trav10A0A075B642 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Gm3375-201ENSMUST00000203929 796 ntBASIC15.02■□□□□ -0
Trav10A0A075B642 Odf3b-204ENSMUST00000227834 930 ntBASIC15.02■□□□□ -0
Trav10A0A075B642 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav10A0A075B642 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Trav10A0A075B642 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav10A0A075B642 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav10A0A075B642 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav10A0A075B642 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav10A0A075B642 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav10A0A075B642 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav10A0A075B642 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.01□□□□□ -0.01
Trav10A0A075B642 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav10A0A075B642 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15□□□□□ -0.01
Trav10A0A075B642 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav10A0A075B642 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15□□□□□ -0.01
Trav10A0A075B642 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav10A0A075B642 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav10A0A075B642 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Gm5417-201ENSMUST00000079706 384 ntBASIC15□□□□□ -0.01
Trav10A0A075B642 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav10A0A075B642 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Gm21814-202ENSMUST00000203277 873 ntBASIC14.99□□□□□ -0.01
Trav10A0A075B642 Gm7791-201ENSMUST00000219066 539 ntBASIC14.99□□□□□ -0.01
Trav10A0A075B642 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav10A0A075B642 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav10A0A075B642 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav10A0A075B642 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav10A0A075B642 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav10A0A075B642 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms