Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Rprl3-201ENSMUST00000157400 290 ntBASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Gm29707-201ENSMUST00000196325 491 ntBASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8n-2A0A075B633 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Gm5867-201ENSMUST00000063197 592 ntBASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav8n-2A0A075B633 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Gm12644-201ENSMUST00000119935 606 ntBASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8n-2A0A075B633 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav8n-2A0A075B633 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8n-2A0A075B633 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8n-2A0A075B633 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms