Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-1A0A075B5Z7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-1A0A075B5Z7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-1A0A075B5Z7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-1A0A075B5Z7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm13186-201ENSMUST00000118031 316 ntBASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm6345-202ENSMUST00000180900 204 ntBASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm10566-201ENSMUST00000086739 996 ntBASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trav5-1A0A075B5Z7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm18115-201ENSMUST00000221209 621 ntBASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms