Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm25056-201ENSMUST00000157372 62 ntBASIC1.02□□□□□ -2.25
Trim9Q8C7M3 Gm24288-201ENSMUST00000157630 144 ntBASIC1.02□□□□□ -2.25
Trim9Q8C7M3 Gm25382-201ENSMUST00000157811 97 ntBASIC1.02□□□□□ -2.25
Trim9Q8C7M3 Gm24202-201ENSMUST00000082948 103 ntBASIC1.02□□□□□ -2.25
Trim9Q8C7M3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Trim9Q8C7M3 Gm25040-201ENSMUST00000103877 66 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 Gm25416-201ENSMUST00000104221 107 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 Gm23853-201ENSMUST00000158375 104 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 Gm43907-201ENSMUST00000203128 117 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 Gm25644-201ENSMUST00000083209 107 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 Mir10b-201ENSMUST00000083566 68 ntBASIC1.01□□□□□ -2.25
Trim9Q8C7M3 Mir1187-201ENSMUST00000116936 122 ntBASIC1□□□□□ -2.25
Trim9Q8C7M3 Gm25045-201ENSMUST00000122670 99 ntBASIC1□□□□□ -2.25
Trim9Q8C7M3 Mir3079-201ENSMUST00000175428 90 ntBASIC1□□□□□ -2.25
Trim9Q8C7M3 Snora26-201ENSMUST00000175614 121 ntBASIC1□□□□□ -2.25
Trim9Q8C7M3 Snora75-201ENSMUST00000082903 133 ntBASIC1□□□□□ -2.25
Trim9Q8C7M3 Gm24162-201ENSMUST00000093665 102 ntBASIC1□□□□□ -2.25
Trim9Q8C7M3 Gm23989-201ENSMUST00000117030 66 ntBASIC0.99□□□□□ -2.25
Trim9Q8C7M3 Gm25166-201ENSMUST00000158909 111 ntBASIC0.99□□□□□ -2.25
Trim9Q8C7M3 Mir100-201ENSMUST00000175270 80 ntBASIC0.99□□□□□ -2.25
Trim9Q8C7M3 Gm25870-201ENSMUST00000179845 79 ntBASIC0.99□□□□□ -2.25
Trim9Q8C7M3 Gm25740-201ENSMUST00000180247 107 ntBASIC0.99□□□□□ -2.25
Trim9Q8C7M3 Gm27987-201ENSMUST00000184023 93 ntBASIC0.99□□□□□ -2.25
Trim9Q8C7M3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Mir466l-201ENSMUST00000104866 121 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm24593-201ENSMUST00000122507 106 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm24199-201ENSMUST00000157808 136 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm24946-201ENSMUST00000158332 106 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm22069-201ENSMUST00000179911 107 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm28435-201ENSMUST00000185496 108 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm29047-201ENSMUST00000189816 108 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Mir376b-201ENSMUST00000195930 82 ntBASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Trim9Q8C7M3 Gm25542-201ENSMUST00000116889 94 ntBASIC0.97□□□□□ -2.25
Trim9Q8C7M3 Gm27587-201ENSMUST00000185116 163 ntBASIC0.97□□□□□ -2.25
Trim9Q8C7M3 Mir1949-202ENSMUST00000199259 70 ntBASIC0.97□□□□□ -2.25
Trim9Q8C7M3 Gm22458-201ENSMUST00000082576 107 ntBASIC0.97□□□□□ -2.25
Trim9Q8C7M3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Trim9Q8C7M3 Gm24221-201ENSMUST00000158833 313 ntBASIC0.96□□□□□ -2.26
Trim9Q8C7M3 Gm25366-201ENSMUST00000158845 124 ntBASIC0.96□□□□□ -2.26
Trim9Q8C7M3 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.96□□□□□ -2.26
Trim9Q8C7M3 Gm24203-201ENSMUST00000082949 114 ntBASIC0.96□□□□□ -2.26
Trim9Q8C7M3 Gm25683-201ENSMUST00000083940 131 ntBASIC0.96□□□□□ -2.26
Trim9Q8C7M3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Gm24983-201ENSMUST00000104457 69 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Gm22100-201ENSMUST00000157926 63 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Gm23893-201ENSMUST00000158106 134 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Gm24500-201ENSMUST00000158447 124 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Mir6342-201ENSMUST00000183870 125 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Gm26207-201ENSMUST00000082909 104 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Mir33-201ENSMUST00000083531 69 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.95□□□□□ -2.26
Trim9Q8C7M3 Gm13065-201ENSMUST00000119178 141 ntBASIC0.94□□□□□ -2.26
Trim9Q8C7M3 Gm25622-201ENSMUST00000157217 104 ntBASIC0.94□□□□□ -2.26
Trim9Q8C7M3 Gm23715-201ENSMUST00000157354 106 ntBASIC0.94□□□□□ -2.26
Trim9Q8C7M3 Gm22539-201ENSMUST00000158167 117 ntBASIC0.94□□□□□ -2.26
Trim9Q8C7M3 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC0.94□□□□□ -2.26
Trim9Q8C7M3 Gm22652-201ENSMUST00000083207 131 ntBASIC0.94□□□□□ -2.26
Trim9Q8C7M3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm23708-201ENSMUST00000104367 123 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm6985-201ENSMUST00000121255 271 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm24868-201ENSMUST00000157265 136 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm24077-201ENSMUST00000158183 136 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm25854-201ENSMUST00000082792 72 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.93□□□□□ -2.26
Trim9Q8C7M3 Gm25787-201ENSMUST00000104709 92 ntBASIC0.92□□□□□ -2.26
Trim9Q8C7M3 Gm24674-201ENSMUST00000179194 104 ntBASIC0.92□□□□□ -2.26
Trim9Q8C7M3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.92□□□□□ -2.26
Trim9Q8C7M3 Gm24233-201ENSMUST00000104317 122 ntBASIC0.91□□□□□ -2.26
Trim9Q8C7M3 Snord2-201ENSMUST00000157899 69 ntBASIC0.91□□□□□ -2.26
Trim9Q8C7M3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.91□□□□□ -2.26
Trim9Q8C7M3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.91□□□□□ -2.26
Trim9Q8C7M3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
Trim9Q8C7M3 Gm25417-201ENSMUST00000104212 131 ntBASIC0.9□□□□□ -2.27
Trim9Q8C7M3 Gm22520-201ENSMUST00000158269 129 ntBASIC0.9□□□□□ -2.27
Trim9Q8C7M3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.9□□□□□ -2.27
Trim9Q8C7M3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.9□□□□□ -2.27
Trim9Q8C7M3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.9□□□□□ -2.27
Trim9Q8C7M3 Mir7079-201ENSMUST00000184697 69 ntBASIC0.9□□□□□ -2.27
Trim9Q8C7M3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm24431-201ENSMUST00000104073 66 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm23500-201ENSMUST00000157735 98 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm25160-201ENSMUST00000158914 102 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm23416-201ENSMUST00000175520 95 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm27415-201ENSMUST00000183720 95 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.89□□□□□ -2.27
Trim9Q8C7M3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.88□□□□□ -2.27
Trim9Q8C7M3 Gm24073-201ENSMUST00000158177 106 ntBASIC0.88□□□□□ -2.27
Trim9Q8C7M3 Gm25161-201ENSMUST00000158913 132 ntBASIC0.88□□□□□ -2.27
Trim9Q8C7M3 Gm25300-201ENSMUST00000175284 84 ntBASIC0.88□□□□□ -2.27
Trim9Q8C7M3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.88□□□□□ -2.27
Trim9Q8C7M3 Gm25609-201ENSMUST00000104019 104 ntBASIC0.87□□□□□ -2.27
Trim9Q8C7M3 Gm24064-201ENSMUST00000157486 106 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 167.3 ms