Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm25170-201ENSMUST00000104191 129 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm23991-201ENSMUST00000117033 93 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm6985-201ENSMUST00000121255 271 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm25968-201ENSMUST00000157167 100 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm26359-201ENSMUST00000158873 101 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm27656-201ENSMUST00000185055 80 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Mir500-201ENSMUST00000093600 92 ntBASIC1.19□□□□□ -2.22
Shkbp1Q6P7W2 Gm24271-201ENSMUST00000102327 111 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Gm25759-201ENSMUST00000103988 129 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Gm24808-201ENSMUST00000157993 118 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Traj60-201ENSMUST00000167781 54 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Gm22413-201ENSMUST00000175465 85 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Gm38323-201ENSMUST00000192450 210 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Mir377-201ENSMUST00000083504 68 ntBASIC1.18□□□□□ -2.22
Shkbp1Q6P7W2 Gm25991-201ENSMUST00000102439 99 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm25416-201ENSMUST00000104221 107 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm22149-201ENSMUST00000104442 136 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm22559-201ENSMUST00000157329 134 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm24549-201ENSMUST00000158647 139 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm24221-201ENSMUST00000158833 313 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm23340-201ENSMUST00000158955 123 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm25354-201ENSMUST00000179110 105 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm22980-201ENSMUST00000082608 70 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Mir30a-201ENSMUST00000083471 71 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Shkbp1Q6P7W2 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Gm22485-201ENSMUST00000157990 109 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Gm25950-201ENSMUST00000175331 100 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Gm23306-201ENSMUST00000179058 105 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Gm16399-201ENSMUST00000181423 219 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Mir6381-201ENSMUST00000183426 87 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Gm6293-201ENSMUST00000050339 195 ntBASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Shkbp1Q6P7W2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Gm25040-201ENSMUST00000103877 66 ntBASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Gm25756-201ENSMUST00000103990 136 ntBASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Gm25847-201ENSMUST00000116793 96 ntBASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Gm22203-201ENSMUST00000158605 58 ntBASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Gm27711-201ENSMUST00000183802 118 ntBASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Shkbp1Q6P7W2 Gm22100-201ENSMUST00000157926 63 ntBASIC1.14□□□□□ -2.23
Shkbp1Q6P7W2 Gm26485-201ENSMUST00000158019 64 ntBASIC1.14□□□□□ -2.23
Shkbp1Q6P7W2 Gm24918-201ENSMUST00000083022 130 ntBASIC1.14□□□□□ -2.23
Shkbp1Q6P7W2 Gm25506-201ENSMUST00000104339 70 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Gm23785-201ENSMUST00000116741 96 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Gm6272-201ENSMUST00000121256 171 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Gm24073-201ENSMUST00000158177 106 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Gm22406-201ENSMUST00000174923 93 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Mir100-201ENSMUST00000175270 80 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Mir448-201ENSMUST00000083516 112 ntBASIC1.13□□□□□ -2.23
Shkbp1Q6P7W2 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Gm11966-201ENSMUST00000119907 87 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Snord2-201ENSMUST00000157899 69 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Mir6342-201ENSMUST00000183870 125 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Mir376b-201ENSMUST00000195930 82 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Gm24311-201ENSMUST00000082570 104 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Mir22-201ENSMUST00000083595 95 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Mir126a-201ENSMUST00000083606 73 ntBASIC1.12□□□□□ -2.23
Shkbp1Q6P7W2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm23500-201ENSMUST00000157735 98 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm26363-201ENSMUST00000158866 83 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm23726-201ENSMUST00000178937 67 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm23410-201ENSMUST00000179967 107 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm42506-201ENSMUST00000202009 150 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm22505-201ENSMUST00000082956 108 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm22363-201ENSMUST00000083100 108 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm23814-201ENSMUST00000083230 102 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Gm24134-201ENSMUST00000083361 71 ntBASIC1.11□□□□□ -2.23
Shkbp1Q6P7W2 Snord71-201ENSMUST00000104361 85 ntBASIC1.1□□□□□ -2.23
Shkbp1Q6P7W2 Mir7091-201ENSMUST00000184075 79 ntBASIC1.1□□□□□ -2.23
Shkbp1Q6P7W2 Mir6394-201ENSMUST00000184738 99 ntBASIC1.1□□□□□ -2.23
Shkbp1Q6P7W2 Mir1949-202ENSMUST00000199259 70 ntBASIC1.1□□□□□ -2.23
Shkbp1Q6P7W2 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Shkbp1Q6P7W2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.09□□□□□ -2.23
Shkbp1Q6P7W2 Gm24378-201ENSMUST00000122699 106 ntBASIC1.09□□□□□ -2.23
Shkbp1Q6P7W2 Gm24500-201ENSMUST00000158447 124 ntBASIC1.09□□□□□ -2.23
Shkbp1Q6P7W2 Gm23477-201ENSMUST00000158882 128 ntBASIC1.09□□□□□ -2.23
Shkbp1Q6P7W2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Gm23989-201ENSMUST00000117030 66 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Mir1904-201ENSMUST00000122702 80 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Gm22233-201ENSMUST00000157464 114 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Gm25868-201ENSMUST00000158253 114 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Mir3079-201ENSMUST00000175428 90 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Gm25128-201ENSMUST00000083339 76 ntBASIC1.08□□□□□ -2.24
Shkbp1Q6P7W2 Gm23060-201ENSMUST00000102345 109 ntBASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 Gm23708-201ENSMUST00000104367 123 ntBASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 Gm13065-201ENSMUST00000119178 141 ntBASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 Gm23853-201ENSMUST00000158375 104 ntBASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 Mir3064-201ENSMUST00000175532 67 ntBASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.07□□□□□ -2.24
Shkbp1Q6P7W2 Gm22652-201ENSMUST00000083207 131 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms