Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.17□□□□□ -2.6
Trav3-3Q5R1C3 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.18□□□□□ -2.6
Trav3-3Q5R1C3 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.18□□□□□ -2.6
Trav3-3Q5R1C3 Gm25599-201ENSMUST00000157816 103 ntBASIC-1.18□□□□□ -2.6
Trav3-3Q5R1C3 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.18□□□□□ -2.6
Trav3-3Q5R1C3 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.18□□□□□ -2.6
Trav3-3Q5R1C3 Gm23528-201ENSMUST00000104571 132 ntBASIC-1.19□□□□□ -2.6
Trav3-3Q5R1C3 Gm26156-201ENSMUST00000116999 123 ntBASIC-1.19□□□□□ -2.6
Trav3-3Q5R1C3 Gm18502-201ENSMUST00000218679 199 ntBASIC-1.19□□□□□ -2.6
Trav3-3Q5R1C3 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.2□□□□□ -2.6
Trav3-3Q5R1C3 Mir677-202ENSMUST00000197076 78 ntBASIC-1.2□□□□□ -2.6
Trav3-3Q5R1C3 Mir6375-201ENSMUST00000197176 95 ntBASIC-1.2□□□□□ -2.6
Trav3-3Q5R1C3 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
Trav3-3Q5R1C3 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.2□□□□□ -2.6
Trav3-3Q5R1C3 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.22□□□□□ -2.6
Trav3-3Q5R1C3 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.22□□□□□ -2.6
Trav3-3Q5R1C3 Gm26498-201ENSMUST00000177799 79 ntBASIC-1.22□□□□□ -2.6
Trav3-3Q5R1C3 Gm26230-201ENSMUST00000180141 79 ntBASIC-1.22□□□□□ -2.6
Trav3-3Q5R1C3 Gm23722-201ENSMUST00000083002 130 ntBASIC-1.22□□□□□ -2.6
Trav3-3Q5R1C3 Gm22196-201ENSMUST00000116865 109 ntBASIC-1.23□□□□□ -2.61
Trav3-3Q5R1C3 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.24□□□□□ -2.61
Trav3-3Q5R1C3 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.24□□□□□ -2.61
Trav3-3Q5R1C3 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.24□□□□□ -2.61
Trav3-3Q5R1C3 Mir669b-201ENSMUST00000102172 97 ntBASIC-1.25□□□□□ -2.61
Trav3-3Q5R1C3 Mir574-201ENSMUST00000103854 78 ntBASIC-1.25□□□□□ -2.61
Trav3-3Q5R1C3 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.25□□□□□ -2.61
Trav3-3Q5R1C3 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.25□□□□□ -2.61
Trav3-3Q5R1C3 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.25□□□□□ -2.61
Trav3-3Q5R1C3 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.25□□□□□ -2.61
Trav3-3Q5R1C3 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.26□□□□□ -2.61
Trav3-3Q5R1C3 Gm23990-201ENSMUST00000117031 117 ntBASIC-1.26□□□□□ -2.61
Trav3-3Q5R1C3 Gm25370-201ENSMUST00000158159 94 ntBASIC-1.26□□□□□ -2.61
Trav3-3Q5R1C3 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.26□□□□□ -2.61
Trav3-3Q5R1C3 Gm24697-201ENSMUST00000083881 107 ntBASIC-1.26□□□□□ -2.61
Trav3-3Q5R1C3 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.27□□□□□ -2.61
Trav3-3Q5R1C3 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.27□□□□□ -2.61
Trav3-3Q5R1C3 mt-Tn-201ENSMUST00000082399 71 ntBASIC-1.28□□□□□ -2.61
Trav3-3Q5R1C3 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.29□□□□□ -2.62
Trav3-3Q5R1C3 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.29□□□□□ -2.62
Trav3-3Q5R1C3 Gm27332-201ENSMUST00000184893 112 ntBASIC-1.29□□□□□ -2.62
Trav3-3Q5R1C3 Gm44853-201ENSMUST00000209070 250 ntBASIC-1.29□□□□□ -2.62
Trav3-3Q5R1C3 Mir23a-201ENSMUST00000083677 75 ntBASIC-1.29□□□□□ -2.62
Trav3-3Q5R1C3 Gm25887-201ENSMUST00000157777 84 ntBASIC-1.3□□□□□ -2.62
Trav3-3Q5R1C3 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.3□□□□□ -2.62
Trav3-3Q5R1C3 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.3□□□□□ -2.62
Trav3-3Q5R1C3 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.3□□□□□ -2.62
Trav3-3Q5R1C3 Gm24141-201ENSMUST00000122776 115 ntBASIC-1.31□□□□□ -2.62
Trav3-3Q5R1C3 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.31□□□□□ -2.62
Trav3-3Q5R1C3 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.32□□□□□ -2.62
Trav3-3Q5R1C3 AC151902.2-201ENSMUST00000226419 301 ntBASIC-1.32□□□□□ -2.62
Trav3-3Q5R1C3 Gm23507-201ENSMUST00000083078 107 ntBASIC-1.32□□□□□ -2.62
Trav3-3Q5R1C3 Gm24842-201ENSMUST00000158681 54 ntBASIC-1.33□□□□□ -2.62
Trav3-3Q5R1C3 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.33□□□□□ -2.62
Trav3-3Q5R1C3 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.34□□□□□ -2.62
Trav3-3Q5R1C3 Gm25623-201ENSMUST00000157216 108 ntBASIC-1.34□□□□□ -2.62
Trav3-3Q5R1C3 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.34□□□□□ -2.62
Trav3-3Q5R1C3 Snord78-201ENSMUST00000104032 66 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm24717-201ENSMUST00000157522 124 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm22258-201ENSMUST00000177645 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm26032-201ENSMUST00000178535 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm25210-201ENSMUST00000178813 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm25157-201ENSMUST00000178914 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm22046-201ENSMUST00000179027 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm22941-201ENSMUST00000179630 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm25471-201ENSMUST00000180126 94 ntBASIC-1.35□□□□□ -2.63
Trav3-3Q5R1C3 Gm25889-201ENSMUST00000157775 107 ntBASIC-1.36□□□□□ -2.63
Trav3-3Q5R1C3 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.36□□□□□ -2.63
Trav3-3Q5R1C3 Gm43977-201ENSMUST00000203970 189 ntBASIC-1.36□□□□□ -2.63
Trav3-3Q5R1C3 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.36□□□□□ -2.63
Trav3-3Q5R1C3 Mir466h-201ENSMUST00000104748 81 ntBASIC-1.37□□□□□ -2.63
Trav3-3Q5R1C3 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.37□□□□□ -2.63
Trav3-3Q5R1C3 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.37□□□□□ -2.63
Trav3-3Q5R1C3 Gm45492-201ENSMUST00000211611 288 ntBASIC-1.37□□□□□ -2.63
Trav3-3Q5R1C3 Gm24947-201ENSMUST00000158334 110 ntBASIC-1.38□□□□□ -2.63
Trav3-3Q5R1C3 Gm43324-201ENSMUST00000197482 289 ntBASIC-1.38□□□□□ -2.63
Trav3-3Q5R1C3 Gm44909-201ENSMUST00000208756 165 ntBASIC-1.38□□□□□ -2.63
Trav3-3Q5R1C3 Gm45429-201ENSMUST00000209527 172 ntBASIC-1.38□□□□□ -2.63
Trav3-3Q5R1C3 Gm24457-201ENSMUST00000083196 105 ntBASIC-1.38□□□□□ -2.63
Trav3-3Q5R1C3 Gm23970-201ENSMUST00000083319 107 ntBASIC-1.38□□□□□ -2.63
Trav3-3Q5R1C3 Gm24106-201ENSMUST00000175498 127 ntBASIC-1.39□□□□□ -2.63
Trav3-3Q5R1C3 Gm22681-201ENSMUST00000083853 106 ntBASIC-1.39□□□□□ -2.63
Trav3-3Q5R1C3 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.4□□□□□ -2.63
Trav3-3Q5R1C3 Gm22055-201ENSMUST00000083388 107 ntBASIC-1.4□□□□□ -2.63
Trav3-3Q5R1C3 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.41□□□□□ -2.64
Trav3-3Q5R1C3 Mir6237-201ENSMUST00000183808 91 ntBASIC-1.41□□□□□ -2.64
Trav3-3Q5R1C3 Gm37746-201ENSMUST00000193249 198 ntBASIC-1.41□□□□□ -2.64
Trav3-3Q5R1C3 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.41□□□□□ -2.64
Trav3-3Q5R1C3 Snord47-201ENSMUST00000083034 77 ntBASIC-1.41□□□□□ -2.64
Trav3-3Q5R1C3 Mir669l-201ENSMUST00000103771 98 ntBASIC-1.42□□□□□ -2.64
Trav3-3Q5R1C3 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.42□□□□□ -2.64
Trav3-3Q5R1C3 Gm27694-201ENSMUST00000184740 86 ntBASIC-1.42□□□□□ -2.64
Trav3-3Q5R1C3 Mir369-201ENSMUST00000083627 79 ntBASIC-1.42□□□□□ -2.64
Trav3-3Q5R1C3 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.43□□□□□ -2.64
Trav3-3Q5R1C3 Gm25010-201ENSMUST00000158403 65 ntBASIC-1.43□□□□□ -2.64
Trav3-3Q5R1C3 Gm22775-201ENSMUST00000177630 120 ntBASIC-1.43□□□□□ -2.64
Trav3-3Q5R1C3 Gm23569-201ENSMUST00000180120 120 ntBASIC-1.43□□□□□ -2.64
Trav3-3Q5R1C3 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.43□□□□□ -2.64
Trav3-3Q5R1C3 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
Trav3-3Q5R1C3 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 157.1 ms