Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm26207-201ENSMUST00000082909 104 ntBASIC1.01□□□□□ -2.25
Col28a1Q2UY11 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Col28a1Q2UY11 Mir7091-201ENSMUST00000184075 79 ntBASIC1□□□□□ -2.25
Col28a1Q2UY11 Gm23301-201ENSMUST00000082713 65 ntBASIC1□□□□□ -2.25
Col28a1Q2UY11 Mir10b-201ENSMUST00000083566 68 ntBASIC1□□□□□ -2.25
Col28a1Q2UY11 Gm37824-201ENSMUST00000193430 3236 ntBASIC1□□□□□ -2.25
Col28a1Q2UY11 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.99□□□□□ -2.25
Col28a1Q2UY11 Gm26274-201ENSMUST00000157103 321 ntBASIC0.99□□□□□ -2.25
Col28a1Q2UY11 Gm22788-201ENSMUST00000157876 61 ntBASIC0.99□□□□□ -2.25
Col28a1Q2UY11 Mir6380-201ENSMUST00000184334 81 ntBASIC0.99□□□□□ -2.25
Col28a1Q2UY11 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.99□□□□□ -2.25
Col28a1Q2UY11 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.99□□□□□ -2.25
Col28a1Q2UY11 Gm26224-201ENSMUST00000082506 80 ntBASIC0.99□□□□□ -2.25
Col28a1Q2UY11 Mir216b-201ENSMUST00000102363 86 ntBASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Gm23991-201ENSMUST00000117033 93 ntBASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Gm24495-201ENSMUST00000178575 79 ntBASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Gm25870-201ENSMUST00000179845 79 ntBASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Gm22253-201ENSMUST00000179870 79 ntBASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Col28a1Q2UY11 Gm23237-201ENSMUST00000104639 92 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Gm11333-201ENSMUST00000119479 148 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Gm25622-201ENSMUST00000157217 104 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Gm22466-201ENSMUST00000175278 69 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Gm23291-201ENSMUST00000175611 78 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Gm24202-201ENSMUST00000082948 103 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Mir22-201ENSMUST00000083595 95 ntBASIC0.97□□□□□ -2.25
Col28a1Q2UY11 Gm22541-201ENSMUST00000158165 127 ntBASIC0.96□□□□□ -2.26
Col28a1Q2UY11 Gm43907-201ENSMUST00000203128 117 ntBASIC0.96□□□□□ -2.26
Col28a1Q2UY11 Gm23570-201ENSMUST00000083029 104 ntBASIC0.96□□□□□ -2.26
Col28a1Q2UY11 Mir30a-201ENSMUST00000083471 71 ntBASIC0.96□□□□□ -2.26
Col28a1Q2UY11 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col28a1Q2UY11 Snord69-201ENSMUST00000104024 80 ntBASIC0.95□□□□□ -2.26
Col28a1Q2UY11 Gm22469-201ENSMUST00000104118 133 ntBASIC0.95□□□□□ -2.26
Col28a1Q2UY11 Gm24549-201ENSMUST00000158647 139 ntBASIC0.95□□□□□ -2.26
Col28a1Q2UY11 Gm25160-201ENSMUST00000158914 102 ntBASIC0.95□□□□□ -2.26
Col28a1Q2UY11 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.95□□□□□ -2.26
Col28a1Q2UY11 Gm22786-201ENSMUST00000104086 122 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Gm25968-201ENSMUST00000157167 100 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Gm23761-201ENSMUST00000158347 104 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Gm25366-201ENSMUST00000158845 124 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Gm26499-201ENSMUST00000178544 79 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Gm26096-201ENSMUST00000179084 79 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Gm23376-201ENSMUST00000082938 160 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Mir27b-201ENSMUST00000083541 73 ntBASIC0.94□□□□□ -2.26
Col28a1Q2UY11 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Col28a1Q2UY11 Gm23203-201ENSMUST00000104374 107 ntBASIC0.93□□□□□ -2.26
Col28a1Q2UY11 Gm24808-201ENSMUST00000157993 118 ntBASIC0.93□□□□□ -2.26
Col28a1Q2UY11 Gm38323-201ENSMUST00000192450 210 ntBASIC0.93□□□□□ -2.26
Col28a1Q2UY11 Gm25683-201ENSMUST00000083940 131 ntBASIC0.93□□□□□ -2.26
Col28a1Q2UY11 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Gm24271-201ENSMUST00000102327 111 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Gm25991-201ENSMUST00000102439 99 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Gm25964-201ENSMUST00000157171 97 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Gm24073-201ENSMUST00000158177 106 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Gm6293-201ENSMUST00000050339 195 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Snora75-201ENSMUST00000082903 133 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Mir377-201ENSMUST00000083504 68 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Mir500-201ENSMUST00000093600 92 ntBASIC0.92□□□□□ -2.26
Col28a1Q2UY11 Gm25416-201ENSMUST00000104221 107 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Mir1197-201ENSMUST00000117037 120 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm6985-201ENSMUST00000121255 271 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm6272-201ENSMUST00000121256 171 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm25619-201ENSMUST00000122621 104 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm22100-201ENSMUST00000157926 63 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm23893-201ENSMUST00000158106 134 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm24311-201ENSMUST00000082570 104 ntBASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Col28a1Q2UY11 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Gm25609-201ENSMUST00000104019 104 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Gm24983-201ENSMUST00000104457 69 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Gm22233-201ENSMUST00000157464 114 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Gm25868-201ENSMUST00000158253 114 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Mir100-201ENSMUST00000175270 80 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Mir6342-201ENSMUST00000183870 125 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.9□□□□□ -2.27
Col28a1Q2UY11 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Col28a1Q2UY11 Gm26359-201ENSMUST00000158873 101 ntBASIC0.89□□□□□ -2.27
Col28a1Q2UY11 Gm22095-201ENSMUST00000158984 150 ntBASIC0.89□□□□□ -2.27
Col28a1Q2UY11 Gm22406-201ENSMUST00000174923 93 ntBASIC0.89□□□□□ -2.27
Col28a1Q2UY11 Mir376b-201ENSMUST00000195930 82 ntBASIC0.89□□□□□ -2.27
Col28a1Q2UY11 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Gm25040-201ENSMUST00000103877 66 ntBASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Snord2-201ENSMUST00000157899 69 ntBASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Gm22203-201ENSMUST00000158605 58 ntBASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Mir3079-201ENSMUST00000175428 90 ntBASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Gm23306-201ENSMUST00000179058 105 ntBASIC0.88□□□□□ -2.27
Col28a1Q2UY11 Gm20305-201ENSMUST00000193226 177 ntBASIC0.88□□□□□ -2.27
Col28a1Q2UY11 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.87□□□□□ -2.27
Col28a1Q2UY11 Gm24221-201ENSMUST00000158833 313 ntBASIC0.87□□□□□ -2.27
Col28a1Q2UY11 Gm22413-201ENSMUST00000175465 85 ntBASIC0.87□□□□□ -2.27
Col28a1Q2UY11 Gm25166-201ENSMUST00000158909 111 ntBASIC0.86□□□□□ -2.27
Col28a1Q2UY11 Gm24020-201ENSMUST00000180156 108 ntBASIC0.86□□□□□ -2.27
Col28a1Q2UY11 Gm38274-201ENSMUST00000195689 148 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms