Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm28256-201ENSMUST00000188953 139 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 Gm28559-201ENSMUST00000190532 139 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 Gm38295-201ENSMUST00000191951 151 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1,82□□□□□ -2,12
Col17a1Q07563 Mir101a-201ENSMUST00000083517 83 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 Gm25629-201ENSMUST00000084001 107 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1,82□□□□□ -2,12
Col17a1Q07563 Mir654-201ENSMUST00000104787 84 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 Gm23661-201ENSMUST00000122630 87 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Gm23072-201ENSMUST00000158243 123 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Gm22944-201ENSMUST00000158662 133 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Gm25838-201ENSMUST00000158920 120 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Mir6419-201ENSMUST00000184784 113 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Gm24920-201ENSMUST00000083018 85 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Mir126a-201ENSMUST00000083606 73 ntBASIC1,81□□□□□ -2,12
Col17a1Q07563 Mir487b-201ENSMUST00000102265 82 ntBASIC1,8□□□□□ -2,12
Col17a1Q07563 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1,8□□□□□ -2,12
Col17a1Q07563 Gm25465-201ENSMUST00000157716 105 ntBASIC1,8□□□□□ -2,12
Col17a1Q07563 Mir3086-201ENSMUST00000175072 87 ntBASIC1,8□□□□□ -2,12
Col17a1Q07563 Gm28862-201ENSMUST00000188246 163 ntBASIC1,8□□□□□ -2,12
Col17a1Q07563 Snord43-201ENSMUST00000199549 108 ntBASIC1,8□□□□□ -2,12
Col17a1Q07563 Mir7241-201ENSMUST00000184532 64 ntBASIC1,79□□□□□ -2,12
Col17a1Q07563 Gm22753-201ENSMUST00000083657 107 ntBASIC1,79□□□□□ -2,12
Col17a1Q07563 Mir1899-201ENSMUST00000122798 96 ntBASIC1,78□□□□□ -2,12
Col17a1Q07563 Gm22401-201ENSMUST00000174927 117 ntBASIC1,78□□□□□ -2,12
Col17a1Q07563 Gm23730-201ENSMUST00000083236 107 ntBASIC1,78□□□□□ -2,12
Col17a1Q07563 Gm25056-201ENSMUST00000157372 62 ntBASIC1,77□□□□□ -2,13
Col17a1Q07563 Gm22200-201ENSMUST00000158614 67 ntBASIC1,77□□□□□ -2,13
Col17a1Q07563 Gm24366-201ENSMUST00000175383 86 ntBASIC1,77□□□□□ -2,13
Col17a1Q07563 Gm27297-201ENSMUST00000183395 105 ntBASIC1,77□□□□□ -2,13
Col17a1Q07563 Gm25648-201ENSMUST00000177844 79 ntBASIC1,76□□□□□ -2,13
Col17a1Q07563 Gm27722-201ENSMUST00000183908 76 ntBASIC1,76□□□□□ -2,13
Col17a1Q07563 Gm28767-201ENSMUST00000188601 114 ntBASIC1,76□□□□□ -2,13
Col17a1Q07563 Gm24202-201ENSMUST00000082948 103 ntBASIC1,76□□□□□ -2,13
Col17a1Q07563 Mir151-201ENSMUST00000083678 68 ntBASIC1,76□□□□□ -2,13
Col17a1Q07563 Gm24009-201ENSMUST00000157734 93 ntBASIC1,75□□□□□ -2,13
Col17a1Q07563 Gm24401-201ENSMUST00000157868 91 ntBASIC1,75□□□□□ -2,13
Col17a1Q07563 Mir6381-201ENSMUST00000183426 87 ntBASIC1,75□□□□□ -2,13
Col17a1Q07563 Gm23881-201ENSMUST00000116872 66 ntBASIC1,75□□□□□ -2,13
Col17a1Q07563 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1,75□□□□□ -2,13
Col17a1Q07563 Mir876-201ENSMUST00000104659 81 ntBASIC1,74□□□□□ -2,13
Col17a1Q07563 Gm15692-201ENSMUST00000152173 352 ntBASIC1,74□□□□□ -2,13
Col17a1Q07563 Gm20386-201ENSMUST00000174010 132 ntBASIC1,73□□□□□ -2,13
Col17a1Q07563 Gm22802-201ENSMUST00000175621 89 ntBASIC1,73□□□□□ -2,13
Col17a1Q07563 Gm27549-201ENSMUST00000183508 62 ntBASIC1,73□□□□□ -2,13
Col17a1Q07563 Mir15b-201ENSMUST00000083646 64 ntBASIC1,73□□□□□ -2,13
Col17a1Q07563 Mir1949-201ENSMUST00000157434 141 ntBASIC1,72□□□□□ -2,13
Col17a1Q07563 Gm26158-201ENSMUST00000158973 119 ntBASIC1,72□□□□□ -2,13
Col17a1Q07563 Mir107-201ENSMUST00000083660 87 ntBASIC1,72□□□□□ -2,13
Col17a1Q07563 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm22088-201ENSMUST00000158341 117 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm25658-201ENSMUST00000158472 128 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm23208-201ENSMUST00000158666 127 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm24323-201ENSMUST00000175342 77 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm44483-201ENSMUST00000197203 97 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm44962-201ENSMUST00000206460 279 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Snord60-201ENSMUST00000082834 78 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Mir22-201ENSMUST00000083595 95 ntBASIC1,71□□□□□ -2,14
Col17a1Q07563 Gm23291-201ENSMUST00000175611 78 ntBASIC1,7□□□□□ -2,14
Col17a1Q07563 Gm22474-201ENSMUST00000179407 107 ntBASIC1,7□□□□□ -2,14
Col17a1Q07563 Gm24612-201ENSMUST00000083267 107 ntBASIC1,7□□□□□ -2,14
Col17a1Q07563 Gm43484-201ENSMUST00000198333 5966 ntBASIC1,7□□□□□ -2,14
Col17a1Q07563 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1,7□□□□□ -2,14
Col17a1Q07563 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm24728-201ENSMUST00000158226 125 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm22914-201ENSMUST00000175195 77 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm25994-201ENSMUST00000175392 101 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,69□□□□□ -2,14
Col17a1Q07563 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm24531-201ENSMUST00000157945 100 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm22887-201ENSMUST00000178586 107 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm27554-201ENSMUST00000185074 98 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm26202-201ENSMUST00000082910 65 ntBASIC1,69□□□□□ -2,14
Col17a1Q07563 Gm25600-201ENSMUST00000158357 106 ntBASIC1,68□□□□□ -2,14
Col17a1Q07563 Gm27517-201ENSMUST00000184347 236 ntBASIC1,68□□□□□ -2,14
Col17a1Q07563 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,68□□□□□ -2,14
Col17a1Q07563 AC116319.1-201ENSMUST00000227765 222 ntBASIC1,68□□□□□ -2,14
Col17a1Q07563 Gm24208-201ENSMUST00000082783 135 ntBASIC1,68□□□□□ -2,14
Col17a1Q07563 Gm24983-201ENSMUST00000104457 69 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Gm24129-201ENSMUST00000158537 97 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Gm22203-201ENSMUST00000158605 58 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Gm25366-201ENSMUST00000158845 124 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Gm22406-201ENSMUST00000174923 93 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Mir5104-201ENSMUST00000175319 94 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Mir7683-201ENSMUST00000183842 61 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 AC238676.2-201ENSMUST00000220910 94 ntBASIC1,67□□□□□ -2,14
Col17a1Q07563 Gm23857-201ENSMUST00000158379 111 ntBASIC1,66□□□□□ -2,14
Col17a1Q07563 Gm45655-201ENSMUST00000211625 160 ntBASIC1,66□□□□□ -2,14
Col17a1Q07563 CT485608.2-201ENSMUST00000227210 291 ntBASIC1,66□□□□□ -2,14
Col17a1Q07563 Mir3057-201ENSMUST00000175040 91 ntBASIC1,65□□□□□ -2,15
Col17a1Q07563 Gm25641-201ENSMUST00000175135 108 ntBASIC1,65□□□□□ -2,15
Col17a1Q07563 Gm22862-201ENSMUST00000178593 121 ntBASIC1,65□□□□□ -2,15
Col17a1Q07563 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1,64□□□□□ -2,15
Col17a1Q07563 Gm24793-201ENSMUST00000104289 132 ntBASIC1,64□□□□□ -2,15
Col17a1Q07563 Gm25974-201ENSMUST00000158701 94 ntBASIC1,64□□□□□ -2,15
Col17a1Q07563 Gm22403-201ENSMUST00000174919 84 ntBASIC1,64□□□□□ -2,15
Col17a1Q07563 Gm44469-201ENSMUST00000198558 79 ntBASIC1,64□□□□□ -2,15
Col17a1Q07563 Gm43907-201ENSMUST00000203128 117 ntBASIC1,64□□□□□ -2,15
Col17a1Q07563 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,64□□□□□ -2,15
Retrieved 100 of 76,532 protein–RNA pairs in 97,6 ms