Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm20305-201ENSMUST00000193226 177 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm24311-201ENSMUST00000082570 104 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm24252-201ENSMUST00000083700 132 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col6a1Q04857 Gm22541-201ENSMUST00000158165 127 ntBASIC1.57□□□□□ -2.16
Col6a1Q04857 Gm24895-201ENSMUST00000122742 74 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Gm25366-201ENSMUST00000158845 124 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Traj60-201ENSMUST00000167781 54 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Gm22466-201ENSMUST00000175278 69 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Gm25354-201ENSMUST00000179110 105 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Gm44396-201ENSMUST00000199843 114 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Gm44962-201ENSMUST00000206460 279 ntBASIC1.56□□□□□ -2.16
Col6a1Q04857 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a1Q04857 Mir216b-201ENSMUST00000102363 86 ntBASIC1.55□□□□□ -2.16
Col6a1Q04857 Gm25416-201ENSMUST00000104221 107 ntBASIC1.55□□□□□ -2.16
Col6a1Q04857 Gm6985-201ENSMUST00000121255 271 ntBASIC1.55□□□□□ -2.16
Col6a1Q04857 Gm43907-201ENSMUST00000203128 117 ntBASIC1.55□□□□□ -2.16
Col6a1Q04857 Mir30a-201ENSMUST00000083471 71 ntBASIC1.55□□□□□ -2.16
Col6a1Q04857 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a1Q04857 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Col6a1Q04857 Gm23339-201ENSMUST00000158962 139 ntBASIC1.54□□□□□ -2.16
Col6a1Q04857 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col6a1Q04857 Gm23130-201ENSMUST00000104252 74 ntBASIC1.53□□□□□ -2.16
Col6a1Q04857 Gm25619-201ENSMUST00000122621 104 ntBASIC1.53□□□□□ -2.16
Col6a1Q04857 Gm24221-201ENSMUST00000158833 313 ntBASIC1.53□□□□□ -2.16
Col6a1Q04857 Gm23726-201ENSMUST00000178937 67 ntBASIC1.53□□□□□ -2.16
Col6a1Q04857 Gm27711-201ENSMUST00000183802 118 ntBASIC1.53□□□□□ -2.16
Col6a1Q04857 Snora75-201ENSMUST00000082903 133 ntBASIC1.53□□□□□ -2.16
Col6a1Q04857 Gm26029-201ENSMUST00000158659 132 ntBASIC1.52□□□□□ -2.17
Col6a1Q04857 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.52□□□□□ -2.17
Col6a1Q04857 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.52□□□□□ -2.17
Col6a1Q04857 Gm24378-201ENSMUST00000122699 106 ntBASIC1.51□□□□□ -2.17
Col6a1Q04857 Gm25964-201ENSMUST00000157171 97 ntBASIC1.51□□□□□ -2.17
Col6a1Q04857 Gm26485-201ENSMUST00000158019 64 ntBASIC1.51□□□□□ -2.17
Col6a1Q04857 Gm27265-201ENSMUST00000183559 77 ntBASIC1.51□□□□□ -2.17
Col6a1Q04857 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Col6a1Q04857 Gm23245-201ENSMUST00000083370 135 ntBASIC1.51□□□□□ -2.17
Col6a1Q04857 Gm24271-201ENSMUST00000102327 111 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm11966-201ENSMUST00000119907 87 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm22559-201ENSMUST00000157329 134 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm24549-201ENSMUST00000158647 139 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Col6a1Q04857 Mir7063-201ENSMUST00000184158 91 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm26224-201ENSMUST00000082506 80 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Mir10b-201ENSMUST00000083566 68 ntBASIC1.5□□□□□ -2.17
Col6a1Q04857 Gm23991-201ENSMUST00000117033 93 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm23500-201ENSMUST00000157735 98 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm23221-201ENSMUST00000158118 93 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm25715-201ENSMUST00000158627 125 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm26359-201ENSMUST00000158873 101 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm22413-201ENSMUST00000175465 85 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm23306-201ENSMUST00000179058 105 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.49□□□□□ -2.17
Col6a1Q04857 Gm23785-201ENSMUST00000116741 96 ntBASIC1.48□□□□□ -2.17
Col6a1Q04857 Gm22406-201ENSMUST00000174923 93 ntBASIC1.48□□□□□ -2.17
Col6a1Q04857 Gm16399-201ENSMUST00000181423 219 ntBASIC1.48□□□□□ -2.17
Col6a1Q04857 Gm24983-201ENSMUST00000104457 69 ntBASIC1.47□□□□□ -2.17
Col6a1Q04857 Snord13-201ENSMUST00000157627 104 ntBASIC1.47□□□□□ -2.17
Col6a1Q04857 Gm25768-201ENSMUST00000158570 98 ntBASIC1.47□□□□□ -2.17
Col6a1Q04857 Mir376b-201ENSMUST00000195930 82 ntBASIC1.47□□□□□ -2.17
Col6a1Q04857 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a1Q04857 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col6a1Q04857 Snord69-201ENSMUST00000104024 80 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Gm25787-201ENSMUST00000104709 92 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Gm11857-201ENSMUST00000119817 324 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Gm24073-201ENSMUST00000158177 106 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Gm24942-201ENSMUST00000158328 114 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Mir7663-201ENSMUST00000183950 61 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Gm44483-201ENSMUST00000197203 97 ntBASIC1.45□□□□□ -2.18
Col6a1Q04857 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col6a1Q04857 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Col6a1Q04857 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Col6a1Q04857 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.44□□□□□ -2.18
Col6a1Q04857 Gm22663-201ENSMUST00000158721 102 ntBASIC1.44□□□□□ -2.18
Col6a1Q04857 Gm23477-201ENSMUST00000158882 128 ntBASIC1.44□□□□□ -2.18
Col6a1Q04857 Mir100-201ENSMUST00000175270 80 ntBASIC1.44□□□□□ -2.18
Col6a1Q04857 Gm38323-201ENSMUST00000192450 210 ntBASIC1.44□□□□□ -2.18
Col6a1Q04857 Mir377-201ENSMUST00000083504 68 ntBASIC1.44□□□□□ -2.18
Col6a1Q04857 Snord2-201ENSMUST00000157899 69 ntBASIC1.43□□□□□ -2.18
Col6a1Q04857 Mir3064-201ENSMUST00000175532 67 ntBASIC1.43□□□□□ -2.18
Col6a1Q04857 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm25040-201ENSMUST00000103877 66 ntBASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm22786-201ENSMUST00000104086 122 ntBASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm22048-201ENSMUST00000104721 89 ntBASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm6272-201ENSMUST00000121256 171 ntBASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm24288-201ENSMUST00000157630 144 ntBASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm24808-201ENSMUST00000157993 118 ntBASIC1.42□□□□□ -2.18
Col6a1Q04857 Gm25756-201ENSMUST00000103990 136 ntBASIC1.41□□□□□ -2.18
Col6a1Q04857 Gm22652-201ENSMUST00000083207 131 ntBASIC1.41□□□□□ -2.18
Col6a1Q04857 Gm24134-201ENSMUST00000083361 71 ntBASIC1.41□□□□□ -2.18
Col6a1Q04857 Gm25506-201ENSMUST00000104339 70 ntBASIC1.4□□□□□ -2.19
Col6a1Q04857 Gm25968-201ENSMUST00000157167 100 ntBASIC1.4□□□□□ -2.19
Col6a1Q04857 Gm22233-201ENSMUST00000157464 114 ntBASIC1.4□□□□□ -2.19
Col6a1Q04857 Gm25868-201ENSMUST00000158253 114 ntBASIC1.4□□□□□ -2.19
Col6a1Q04857 Mir500-201ENSMUST00000093600 92 ntBASIC1.4□□□□□ -2.19
Col6a1Q04857 Gm13065-201ENSMUST00000119178 141 ntBASIC1.39□□□□□ -2.19
Col6a1Q04857 Gm22074-201ENSMUST00000158595 113 ntBASIC1.39□□□□□ -2.19
Col6a1Q04857 Mir6342-201ENSMUST00000183870 125 ntBASIC1.39□□□□□ -2.19
Col6a1Q04857 Gm27717-201ENSMUST00000183933 151 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 147.4 ms