Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm22786-201ENSMUST00000104086 122 ntBASIC1,53□□□□□ -2,16
Thbs1P35441 Gm13065-201ENSMUST00000119178 141 ntBASIC1,53□□□□□ -2,16
Thbs1P35441 Gm22663-201ENSMUST00000158721 102 ntBASIC1,53□□□□□ -2,16
Thbs1P35441 Mir100-201ENSMUST00000175270 80 ntBASIC1,53□□□□□ -2,16
Thbs1P35441 Gm27554-201ENSMUST00000185074 98 ntBASIC1,53□□□□□ -2,16
Thbs1P35441 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,53□□□□□ -2,16
Thbs1P35441 Gm22761-201ENSMUST00000102278 96 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm22673-201ENSMUST00000104415 131 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Mir873a-201ENSMUST00000104863 77 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm25541-201ENSMUST00000116888 126 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm6272-201ENSMUST00000121256 171 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm24808-201ENSMUST00000157993 118 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm23649-201ENSMUST00000179007 107 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm28383-201ENSMUST00000187563 139 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Gm26224-201ENSMUST00000082506 80 ntBASIC1,52□□□□□ -2,17
Thbs1P35441 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1,52□□□□□ -2,17
Thbs1P35441 Gm24262-201ENSMUST00000157431 144 ntBASIC1,51□□□□□ -2,17
Thbs1P35441 Gm22603-201ENSMUST00000157603 96 ntBASIC1,51□□□□□ -2,17
Thbs1P35441 Gm23856-201ENSMUST00000158380 99 ntBASIC1,51□□□□□ -2,17
Thbs1P35441 Gm25641-201ENSMUST00000175135 108 ntBASIC1,51□□□□□ -2,17
Thbs1P35441 Gm27248-201ENSMUST00000184004 166 ntBASIC1,51□□□□□ -2,17
Thbs1P35441 Mir1949-202ENSMUST00000199259 70 ntBASIC1,51□□□□□ -2,17
Thbs1P35441 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,51□□□□□ -2,17
Thbs1P35441 Gm24580-201ENSMUST00000103965 131 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 Gm26257-201ENSMUST00000122500 107 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 Gm26181-201ENSMUST00000157687 106 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 Gm22203-201ENSMUST00000158605 58 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 Gm42677-201ENSMUST00000196363 127 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 AC117232.1-201ENSMUST00000197964 119 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 Mir500-201ENSMUST00000093600 92 ntBASIC1,5□□□□□ -2,17
Thbs1P35441 Gm23708-201ENSMUST00000104367 123 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Mir6351-201ENSMUST00000183826 99 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Gm29432-201ENSMUST00000185397 139 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Mir200b-201ENSMUST00000083615 70 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Mir148b-201ENSMUST00000083626 97 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Gm23347-201ENSMUST00000083823 82 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Mir494-201ENSMUST00000093632 85 ntBASIC1,49□□□□□ -2,17
Thbs1P35441 Gm25968-201ENSMUST00000157167 100 ntBASIC1,48□□□□□ -2,17
Thbs1P35441 Gm24222-201ENSMUST00000158834 93 ntBASIC1,48□□□□□ -2,17
Thbs1P35441 Gm24174-201ENSMUST00000158933 111 ntBASIC1,48□□□□□ -2,17
Thbs1P35441 Gm27326-201ENSMUST00000183504 95 ntBASIC1,48□□□□□ -2,17
Thbs1P35441 Gm27549-201ENSMUST00000183508 62 ntBASIC1,48□□□□□ -2,17
Thbs1P35441 Gm28794-201ENSMUST00000185276 136 ntBASIC1,48□□□□□ -2,17
Thbs1P35441 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1,48□□□□□ -2,17
Thbs1P35441 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1,48□□□□□ -2,17
Thbs1P35441 Mir6342-201ENSMUST00000183870 125 ntBASIC1,47□□□□□ -2,17
Thbs1P35441 Mir15b-201ENSMUST00000083646 64 ntBASIC1,47□□□□□ -2,17
Thbs1P35441 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,47□□□□□ -2,17
Thbs1P35441 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,46□□□□□ -2,18
Thbs1P35441 Gm26082-201ENSMUST00000104070 127 ntBASIC1,46□□□□□ -2,18
Thbs1P35441 Gm23410-201ENSMUST00000179967 107 ntBASIC1,46□□□□□ -2,18
Thbs1P35441 Gm22505-201ENSMUST00000082956 108 ntBASIC1,46□□□□□ -2,18
Thbs1P35441 Gm22363-201ENSMUST00000083100 108 ntBASIC1,46□□□□□ -2,18
Thbs1P35441 Gm23814-201ENSMUST00000083230 102 ntBASIC1,46□□□□□ -2,18
Thbs1P35441 Gm25128-201ENSMUST00000083339 76 ntBASIC1,46□□□□□ -2,18
Thbs1P35441 Mir669h-201ENSMUST00000116944 125 ntBASIC1,45□□□□□ -2,18
Thbs1P35441 Gm23853-201ENSMUST00000158375 104 ntBASIC1,45□□□□□ -2,18
Thbs1P35441 Gm25328-201ENSMUST00000175013 107 ntBASIC1,45□□□□□ -2,18
Thbs1P35441 Gm25936-201ENSMUST00000179952 114 ntBASIC1,45□□□□□ -2,18
Thbs1P35441 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,45□□□□□ -2,18
Thbs1P35441 Gm23012-201ENSMUST00000104149 83 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm25274-201ENSMUST00000104296 135 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm24233-201ENSMUST00000104317 122 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm23989-201ENSMUST00000117030 66 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm25183-201ENSMUST00000157752 106 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Mir3968-201ENSMUST00000175355 100 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Mir3108-201ENSMUST00000175500 79 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm27265-201ENSMUST00000183559 77 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm27977-201ENSMUST00000185159 111 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Snord95-201ENSMUST00000082846 68 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm24927-201ENSMUST00000083397 107 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Mir448-201ENSMUST00000083516 112 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,44□□□□□ -2,18
Thbs1P35441 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1,44□□□□□ -2,18
Thbs1P35441 Gm25170-201ENSMUST00000104191 129 ntBASIC1,43□□□□□ -2,18
Thbs1P35441 Gm27450-201ENSMUST00000104632 90 ntBASIC1,43□□□□□ -2,18
Thbs1P35441 Gm22078-201ENSMUST00000157593 103 ntBASIC1,43□□□□□ -2,18
Thbs1P35441 Gm25656-201ENSMUST00000158466 66 ntBASIC1,43□□□□□ -2,18
Thbs1P35441 Gm25300-201ENSMUST00000175284 84 ntBASIC1,43□□□□□ -2,18
Thbs1P35441 Gm27937-201ENSMUST00000183605 88 ntBASIC1,43□□□□□ -2,18
Thbs1P35441 Gm25166-201ENSMUST00000158909 111 ntBASIC1,42□□□□□ -2,18
Thbs1P35441 Mir3079-201ENSMUST00000175428 90 ntBASIC1,42□□□□□ -2,18
Thbs1P35441 Gm16399-201ENSMUST00000181423 219 ntBASIC1,42□□□□□ -2,18
Thbs1P35441 Gm43911-201ENSMUST00000203097 76 ntBASIC1,42□□□□□ -2,18
Thbs1P35441 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,41□□□□□ -2,18
Thbs1P35441 Gm24226-201ENSMUST00000158826 97 ntBASIC1,41□□□□□ -2,18
Thbs1P35441 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1,4□□□□□ -2,19
Thbs1P35441 Gm42533-201ENSMUST00000196247 157 ntBASIC1,4□□□□□ -2,19
Thbs1P35441 Gm44962-201ENSMUST00000206460 279 ntBASIC1,4□□□□□ -2,19
Thbs1P35441 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,4□□□□□ -2,19
Thbs1P35441 Gm12432-201ENSMUST00000119540 186 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Gm15115-201ENSMUST00000121145 264 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Traj60-201ENSMUST00000167781 54 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Gm25648-201ENSMUST00000177844 79 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Mir7010-201ENSMUST00000183464 63 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Mir320-201ENSMUST00000083594 82 ntBASIC1,39□□□□□ -2,19
Thbs1P35441 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1,38□□□□□ -2,19
Thbs1P35441 Gm22233-201ENSMUST00000157464 114 ntBASIC1,38□□□□□ -2,19
Thbs1P35441 Gm24902-201ENSMUST00000158126 123 ntBASIC1,38□□□□□ -2,19
Retrieved 100 of 76,532 protein–RNA pairs in 90,3 ms