Protein–RNA interactions for Protein: P17095
Hmga1, High mobility group protein HMG-I/HMG-Y, mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Hmga1 | P17095 | Gm25440-201 | ENSMUST00000158279 | 154 nt | BASIC | -3,43 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm25229-201 | ENSMUST00000178587 | 79 nt | BASIC | -3,43 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm25512-201 | ENSMUST00000083863 | 107 nt | BASIC | -3,43 | □□□□□ -2,96 | | |
Hmga1 | P17095 | AC121844.1-201 | ENSMUST00000218706 | 137 nt | BASIC | -3,44 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm25507-201 | ENSMUST00000116981 | 144 nt | BASIC | -3,45 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm25749-201 | ENSMUST00000175485 | 111 nt | BASIC | -3,45 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm27792-201 | ENSMUST00000184031 | 115 nt | BASIC | -3,45 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm9805-201 | ENSMUST00000055305 | 171 nt | APPRIS P1 BASIC | -3,45 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm22055-201 | ENSMUST00000083388 | 107 nt | BASIC | -3,45 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm25680-201 | ENSMUST00000116917 | 126 nt | BASIC | -3,46 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm22635-201 | ENSMUST00000116962 | 126 nt | BASIC | -3,46 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Mir7673-201 | ENSMUST00000184567 | 64 nt | BASIC | -3,46 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm24762-201 | ENSMUST00000083689 | 104 nt | BASIC | -3,47 | □□□□□ -2,96 | | |
Hmga1 | P17095 | Gm24504-201 | ENSMUST00000157679 | 100 nt | BASIC | -3,48 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm26231-201 | ENSMUST00000175218 | 67 nt | BASIC | -3,48 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm26287-201 | ENSMUST00000158887 | 81 nt | BASIC | -3,49 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Zfp950-206 | ENSMUST00000178819 | 171 nt | BASIC | -3,49 | □□□□□ -2,97 | | |
Hmga1 | P17095 | AC157602.1-201 | ENSMUST00000197446 | 105 nt | BASIC | -3,49 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Mir192-201 | ENSMUST00000083589 | 89 nt | BASIC | -3,49 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm23344-201 | ENSMUST00000083818 | 68 nt | BASIC | -3,49 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm21940-201 | ENSMUST00000204940 | 2278 nt | BASIC | -3,49 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Mir539-201 | ENSMUST00000102109 | 74 nt | BASIC | -3,5 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm29235-201 | ENSMUST00000185786 | 442 nt | TSL 5 BASIC | -3,5 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm23262-201 | ENSMUST00000158323 | 168 nt | BASIC | -3,51 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm23817-201 | ENSMUST00000158449 | 104 nt | BASIC | -3,51 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm27957-201 | ENSMUST00000184054 | 127 nt | BASIC | -3,51 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm28011-201 | ENSMUST00000184097 | 175 nt | BASIC | -3,51 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm27997-201 | ENSMUST00000184942 | 69 nt | BASIC | -3,51 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Traj53-201 | ENSMUST00000103690 | 66 nt | APPRIS P1 BASIC | -3,52 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm27723-201 | ENSMUST00000157398 | 63 nt | BASIC | -3,52 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm26437-201 | ENSMUST00000082595 | 105 nt | BASIC | -3,52 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Mir463-201 | ENSMUST00000093570 | 75 nt | BASIC | -3,52 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm23080-201 | ENSMUST00000157846 | 103 nt | BASIC | -3,53 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm22708-201 | ENSMUST00000158987 | 103 nt | BASIC | -3,53 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm44858-201 | ENSMUST00000207360 | 154 nt | BASIC | -3,53 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm25705-201 | ENSMUST00000083119 | 104 nt | BASIC | -3,53 | □□□□□ -2,97 | | |
Hmga1 | P17095 | Gm14883-201 | ENSMUST00000120179 | 157 nt | BASIC | -3,54 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm17542-201 | ENSMUST00000169859 | 99 nt | APPRIS P1 TSL 5 BASIC | -3,54 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Snord90-201 | ENSMUST00000104568 | 111 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm23111-201 | ENSMUST00000122652 | 105 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm23958-201 | ENSMUST00000157207 | 105 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm24392-201 | ENSMUST00000158136 | 103 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm24501-201 | ENSMUST00000158452 | 62 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm24667-201 | ENSMUST00000158938 | 103 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm23730-201 | ENSMUST00000083236 | 107 nt | BASIC | -3,55 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Mir488-201 | ENSMUST00000093595 | 109 nt | BASIC | -3,56 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm10959-201 | ENSMUST00000106431 | 72 nt | APPRIS P1 TSL 5 BASIC | -3,57 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm25929-201 | ENSMUST00000082784 | 107 nt | BASIC | -3,57 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm24070-201 | ENSMUST00000104519 | 130 nt | BASIC | -3,58 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm23351-201 | ENSMUST00000158427 | 125 nt | BASIC | -3,58 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm28008-201 | ENSMUST00000184021 | 186 nt | BASIC | -3,58 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm22459-201 | ENSMUST00000082577 | 108 nt | BASIC | -3,58 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Mir146-201 | ENSMUST00000083667 | 65 nt | BASIC | -3,58 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm26307-201 | ENSMUST00000157767 | 126 nt | BASIC | -3,59 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm27934-201 | ENSMUST00000158795 | 63 nt | BASIC | -3,59 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Gm27585-201 | ENSMUST00000183717 | 199 nt | BASIC | -3,59 | □□□□□ -2,98 | | |
Hmga1 | P17095 | Mir582-201 | ENSMUST00000103758 | 81 nt | BASIC | -3,6 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm24111-201 | ENSMUST00000175491 | 97 nt | BASIC | -3,61 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm25895-201 | ENSMUST00000083714 | 100 nt | BASIC | -3,61 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm23066-201 | ENSMUST00000158237 | 71 nt | BASIC | -3,62 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Mir6395-201 | ENSMUST00000183885 | 91 nt | BASIC | -3,62 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm23306-201 | ENSMUST00000179058 | 105 nt | BASIC | -3,63 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm25937-201 | ENSMUST00000083912 | 107 nt | BASIC | -3,63 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Mir384-201 | ENSMUST00000083565 | 88 nt | BASIC | -3,64 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm23779-201 | ENSMUST00000157938 | 64 nt | BASIC | -3,65 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Vmn2r-ps116-201 | ENSMUST00000175997 | 126 nt | BASIC | -3,65 | □□□□□ -2,99 | | |
Hmga1 | P17095 | Gm23412-201 | ENSMUST00000083017 | 107 nt | BASIC | -3,66 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm25793-201 | ENSMUST00000083287 | 107 nt | BASIC | -3,66 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm24697-201 | ENSMUST00000083881 | 107 nt | BASIC | -3,66 | □□□□□ -3 | | |
Hmga1 | P17095 | Traj30-201 | ENSMUST00000103711 | 59 nt | APPRIS P1 BASIC | -3,67 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm25995-201 | ENSMUST00000175396 | 142 nt | BASIC | -3,67 | □□□□□ -3 | | |
Hmga1 | P17095 | Mir5619-201 | ENSMUST00000176065 | 61 nt | BASIC | -3,67 | □□□□□ -3 | | |
Hmga1 | P17095 | Mir466b-3-201 | ENSMUST00000103806 | 81 nt | BASIC | -3,68 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm22841-201 | ENSMUST00000158443 | 62 nt | BASIC | -3,68 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm43238-201 | ENSMUST00000196463 | 359 nt | BASIC | -3,68 | □□□□□ -3 | | |
Hmga1 | P17095 | AC153646.2-201 | ENSMUST00000220516 | 109 nt | BASIC | -3,68 | □□□□□ -3 | | |
Hmga1 | P17095 | mt-Ta-201 | ENSMUST00000082398 | 69 nt | BASIC | -3,68 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm22148-201 | ENSMUST00000104445 | 107 nt | BASIC | -3,69 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm21961-201 | ENSMUST00000110100 | 114 nt | APPRIS P1 TSL 5 BASIC | -3,69 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm22503-201 | ENSMUST00000158983 | 115 nt | BASIC | -3,69 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm11420-201 | ENSMUST00000120047 | 402 nt | BASIC | -3,7 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm23986-201 | ENSMUST00000157144 | 63 nt | BASIC | -3,7 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm11835-201 | ENSMUST00000120635 | 663 nt | BASIC | -3,71 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm44395-201 | ENSMUST00000197056 | 153 nt | BASIC | -3,71 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm23260-201 | ENSMUST00000158317 | 172 nt | BASIC | -3,72 | □□□□□ -3 | | |
Hmga1 | P17095 | Snora15-201 | ENSMUST00000177461 | 131 nt | BASIC | -3,72 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm45655-201 | ENSMUST00000211625 | 160 nt | BASIC | -3,72 | □□□□□ -3 | | |
Hmga1 | P17095 | Gm23212-201 | ENSMUST00000122718 | 60 nt | BASIC | -3,73 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm45005-201 | ENSMUST00000206640 | 157 nt | BASIC | -3,73 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm25052-201 | ENSMUST00000122661 | 158 nt | BASIC | -3,74 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm27937-201 | ENSMUST00000183605 | 88 nt | BASIC | -3,74 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Olfr1401-ps1-201 | ENSMUST00000202296 | 211 nt | BASIC | -3,74 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm24201-201 | ENSMUST00000082946 | 125 nt | BASIC | -3,74 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm22313-201 | ENSMUST00000158008 | 129 nt | BASIC | -3,75 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm24631-201 | ENSMUST00000122765 | 81 nt | BASIC | -3,76 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm24016-201 | ENSMUST00000157726 | 68 nt | BASIC | -3,76 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm27549-201 | ENSMUST00000183508 | 62 nt | BASIC | -3,76 | □□□□□ -3,01 | | |
Hmga1 | P17095 | AC109214.2-201 | ENSMUST00000220089 | 358 nt | BASIC | -3,76 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm22573-201 | ENSMUST00000082982 | 102 nt | BASIC | -3,76 | □□□□□ -3,01 | | |
Hmga1 | P17095 | Gm25982-201 | ENSMUST00000157920 | 101 nt | BASIC | -3,77 | □□□□□ -3,01 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 127,9 ms