Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Mir6342-201ENSMUST00000183870 125 ntBASIC1,79□□□□□ -2,12
Msx1P13297 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1,79□□□□□ -2,12
Msx1P13297 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1,78□□□□□ -2,12
Msx1P13297 Mir487b-201ENSMUST00000102265 82 ntBASIC1,78□□□□□ -2,12
Msx1P13297 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1,78□□□□□ -2,12
Msx1P13297 Gm27420-201ENSMUST00000183823 79 ntBASIC1,78□□□□□ -2,12
Msx1P13297 Mir7678-201ENSMUST00000185076 71 ntBASIC1,78□□□□□ -2,12
Msx1P13297 Gm37778-201ENSMUST00000191732 190 ntBASIC1,78□□□□□ -2,12
Msx1P13297 Snord96a-201ENSMUST00000082791 81 ntBASIC1,78□□□□□ -2,12
Msx1P13297 Mir92-2-201ENSMUST00000083679 91 ntBASIC1,78□□□□□ -2,12
Msx1P13297 Gm24478-201ENSMUST00000157439 158 ntBASIC1,77□□□□□ -2,13
Msx1P13297 Gm23967-201ENSMUST00000175062 78 ntBASIC1,77□□□□□ -2,13
Msx1P13297 Gm23813-201ENSMUST00000175153 77 ntBASIC1,77□□□□□ -2,13
Msx1P13297 Gm25465-201ENSMUST00000157716 105 ntBASIC1,76□□□□□ -2,13
Msx1P13297 Mir6950-201ENSMUST00000184438 73 ntBASIC1,76□□□□□ -2,13
Msx1P13297 Mir669h-201ENSMUST00000116944 125 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Gm22087-201ENSMUST00000158339 88 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Gm22663-201ENSMUST00000158721 102 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Gm27265-201ENSMUST00000183559 77 ntBASIC1,75□□□□□ -2,13
Msx1P13297 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Gm24624-201ENSMUST00000082617 164 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Gm22652-201ENSMUST00000083207 131 ntBASIC1,75□□□□□ -2,13
Msx1P13297 Gm23012-201ENSMUST00000104149 83 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Gm25968-201ENSMUST00000157167 100 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Gm24770-201ENSMUST00000158505 92 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Gm27511-201ENSMUST00000183502 127 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Gm27717-201ENSMUST00000183933 151 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Mir7673-201ENSMUST00000184567 64 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Mir1949-202ENSMUST00000199259 70 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Gm24151-201ENSMUST00000082758 141 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Mir500-201ENSMUST00000093600 92 ntBASIC1,74□□□□□ -2,13
Msx1P13297 Gm25524-201ENSMUST00000101821 107 ntBASIC1,73□□□□□ -2,13
Msx1P13297 Gm13065-201ENSMUST00000119178 141 ntBASIC1,73□□□□□ -2,13
Msx1P13297 U6.1-201ENSMUST00000157443 101 ntBASIC1,73□□□□□ -2,13
Msx1P13297 Mir3098-201ENSMUST00000175416 87 ntBASIC1,73□□□□□ -2,13
Msx1P13297 Mir9-3-201ENSMUST00000175497 90 ntBASIC1,73□□□□□ -2,13
Msx1P13297 Gm26224-201ENSMUST00000082506 80 ntBASIC1,73□□□□□ -2,13
Msx1P13297 Gm23730-201ENSMUST00000083236 107 ntBASIC1,73□□□□□ -2,13
Msx1P13297 Gm23708-201ENSMUST00000104367 123 ntBASIC1,72□□□□□ -2,13
Msx1P13297 Gm6272-201ENSMUST00000121256 171 ntBASIC1,72□□□□□ -2,13
Msx1P13297 Mir6995-201ENSMUST00000183658 71 ntBASIC1,72□□□□□ -2,13
Msx1P13297 Gm28383-201ENSMUST00000187563 139 ntBASIC1,72□□□□□ -2,13
Msx1P13297 Gm38323-201ENSMUST00000192450 210 ntBASIC1,72□□□□□ -2,13
Msx1P13297 Snord95-201ENSMUST00000082846 68 ntBASIC1,72□□□□□ -2,13
Msx1P13297 AC238676.2-201ENSMUST00000220910 94 ntBASIC1,71□□□□□ -2,14
Msx1P13297 Gm22459-201ENSMUST00000082577 108 ntBASIC1,71□□□□□ -2,14
Msx1P13297 n-R5s12-201ENSMUST00000083785 119 ntBASIC1,71□□□□□ -2,14
Msx1P13297 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,71□□□□□ -2,14
Msx1P13297 Mir3096-201ENSMUST00000116685 71 ntBASIC1,7□□□□□ -2,14
Msx1P13297 Gm25936-201ENSMUST00000179952 114 ntBASIC1,7□□□□□ -2,14
Msx1P13297 Gm27326-201ENSMUST00000183504 95 ntBASIC1,7□□□□□ -2,14
Msx1P13297 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,7□□□□□ -2,14
Msx1P13297 Gm24612-201ENSMUST00000083267 107 ntBASIC1,7□□□□□ -2,14
Msx1P13297 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,69□□□□□ -2,14
Msx1P13297 Gm22761-201ENSMUST00000102278 96 ntBASIC1,69□□□□□ -2,14
Msx1P13297 Mir8119-201ENSMUST00000183371 129 ntBASIC1,69□□□□□ -2,14
Msx1P13297 Gm42677-201ENSMUST00000196363 127 ntBASIC1,69□□□□□ -2,14
Msx1P13297 Gm26438-201ENSMUST00000082593 107 ntBASIC1,69□□□□□ -2,14
Msx1P13297 Gm24271-201ENSMUST00000102327 111 ntBASIC1,68□□□□□ -2,14
Msx1P13297 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,67□□□□□ -2,14
Msx1P13297 Gm24233-201ENSMUST00000104317 122 ntBASIC1,67□□□□□ -2,14
Msx1P13297 Gm28794-201ENSMUST00000185276 136 ntBASIC1,67□□□□□ -2,14
Msx1P13297 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,67□□□□□ -2,14
Msx1P13297 Mir653-201ENSMUST00000102402 85 ntBASIC1,66□□□□□ -2,14
Msx1P13297 Gm24984-201ENSMUST00000104454 133 ntBASIC1,66□□□□□ -2,14
Msx1P13297 Gm22717-201ENSMUST00000122703 171 ntBASIC1,66□□□□□ -2,14
Msx1P13297 Gm24262-201ENSMUST00000157431 144 ntBASIC1,66□□□□□ -2,14
Msx1P13297 Gm24783-201ENSMUST00000157639 100 ntBASIC1,66□□□□□ -2,14
Msx1P13297 Gm24165-201ENSMUST00000082718 128 ntBASIC1,66□□□□□ -2,14
Msx1P13297 Gm25541-201ENSMUST00000116888 126 ntBASIC1,65□□□□□ -2,15
Msx1P13297 Gm25440-201ENSMUST00000158279 154 ntBASIC1,65□□□□□ -2,15
Msx1P13297 Gm23630-201ENSMUST00000175292 104 ntBASIC1,65□□□□□ -2,15
Msx1P13297 Gm29344-201ENSMUST00000068143 210 ntBASIC1,65□□□□□ -2,15
Msx1P13297 Mir148b-201ENSMUST00000083626 97 ntBASIC1,65□□□□□ -2,15
Msx1P13297 Gm26082-201ENSMUST00000104070 127 ntBASIC1,64□□□□□ -2,15
Msx1P13297 Gm24902-201ENSMUST00000158126 123 ntBASIC1,64□□□□□ -2,15
Msx1P13297 Gm22401-201ENSMUST00000174927 117 ntBASIC1,64□□□□□ -2,15
Msx1P13297 Gm23989-201ENSMUST00000117030 66 ntBASIC1,63□□□□□ -2,15
Msx1P13297 Gm24808-201ENSMUST00000157993 118 ntBASIC1,63□□□□□ -2,15
Msx1P13297 Gm24500-201ENSMUST00000158447 124 ntBASIC1,63□□□□□ -2,15
Msx1P13297 Gm25656-201ENSMUST00000158466 66 ntBASIC1,63□□□□□ -2,15
Msx1P13297 Gm25831-201ENSMUST00000158924 163 ntBASIC1,63□□□□□ -2,15
Msx1P13297 AC117232.1-201ENSMUST00000197964 119 ntBASIC1,63□□□□□ -2,15
Msx1P13297 Gm43911-201ENSMUST00000203097 76 ntBASIC1,63□□□□□ -2,15
Msx1P13297 Gm22673-201ENSMUST00000104415 131 ntBASIC1,62□□□□□ -2,15
Msx1P13297 Gm14533-201ENSMUST00000117088 93 ntBASIC1,62□□□□□ -2,15
Msx1P13297 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,62□□□□□ -2,15
Msx1P13297 Gm44490-201ENSMUST00000198566 127 ntBASIC1,62□□□□□ -2,15
Msx1P13297 Gm45754-201ENSMUST00000212380 279 ntBASIC1,62□□□□□ -2,15
Msx1P13297 Mir3071-201ENSMUST00000093621 80 ntBASIC1,62□□□□□ -2,15
Msx1P13297 Mir3079-201ENSMUST00000175428 90 ntBASIC1,61□□□□□ -2,15
Msx1P13297 Gm25279-201ENSMUST00000122608 133 ntBASIC1,6□□□□□ -2,15
Msx1P13297 Gm23853-201ENSMUST00000158375 104 ntBASIC1,6□□□□□ -2,15
Msx1P13297 Traj60-201ENSMUST00000167781 54 ntBASIC1,6□□□□□ -2,15
Msx1P13297 Mir3968-201ENSMUST00000175355 100 ntBASIC1,6□□□□□ -2,15
Msx1P13297 Mir7665-201ENSMUST00000184907 63 ntBASIC1,6□□□□□ -2,15
Msx1P13297 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1,59□□□□□ -2,15
Msx1P13297 Mir873a-201ENSMUST00000104863 77 ntBASIC1,59□□□□□ -2,15
Msx1P13297 Gm25010-201ENSMUST00000158403 65 ntBASIC1,59□□□□□ -2,15
Retrieved 100 of 76,532 protein–RNA pairs in 15,5 ms